Detailed information of Actinostola_19037 in Actinostola sp. Cb2023 Gene info
Gene IDAnnotationScaffoldStartEndStrand
Actinostola_19037APOPTOTIC PROTEASE-ACTIVATING FACTOR 1scaffold749_size22204341273138159+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00145DNA_methylaseC-5 cytosine-specific DNA methylaseDomainInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF00611FCHFes/CIP4, and EFC/F-BAR homology domainFamilyInterproscan
PF00619CARDCaspase recruitment domainDomainInterproscan
PF00855PWWPPWWP domainDomainInterproscan
PF00931NB-ARCNB-ARC domainDomainInterproscan
PF16858CNDH2_CCondensin II complex subunit CAP-H2 or CNDH2, C-terminal wHTH domainDomainInterproscan
PF17908APAF1_CAPAF-1 helical domainDomainInterproscan
PF17980ADD_DNMT3Cysteine rich ADD domain in DNMT3DomainInterproscan
PF21255ADDz_Dnmt3bDNMT3, ADD PHD zinc fingerDomainInterproscan
PF21296APAF-1-like_WHDApoptotic protease-activating factor 1-like, winged-helix domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000313DomainPWWP domainInterproscan
IPR001060DomainFCH domainInterproscan
IPR001315DomainCARD domainInterproscan
IPR001525FamilyC-5 cytosine methyltransferaseInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR002182DomainNB-ARCInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR011029Homologous_superfamilyDeath-like domain superfamilyInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR018117Active_siteDNA methylase, C-5 cytosine-specific, active siteInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR020472RepeatG-protein beta WD-40 repeatInterproscan
IPR025766DomainADD domainInterproscan
IPR027267Homologous_superfamilyAH/BAR domain superfamilyInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR029063Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR031160DomainF-BAR domainInterproscan
IPR031737DomainCondensin-2 complex subunit H2, C-terminalInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR040552DomainDNMT3, cysteine rich ADD domain, GATA1-like zinc fingerInterproscan
IPR041452DomainAPAF-1 helical domainInterproscan
IPR042197Homologous_superfamilyApoptotic protease-activating factors, helical domainInterproscan
IPR048975DomainApoptotic protease-activating factor 1, winged-helix domainInterproscan
IPR049554DomainDNMT3, ADD domain, PHD zinc fingerInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR22845APOPTOTIC PROTEASE-ACTIVATING FACTOR 1Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0008168Molecular Functionmethyltransferase activityInterproscan
GO:0042981Biological Processregulation of apoptotic processInterproscan
GO:0043531Molecular FunctionADP bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
------

TOP