Gene detail

Detailed information of Actinostola_18944 in Actinostola sp. Cb2023 Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Actinostola_18944	KU AUTOANTIGEN DNA HELICASE	scaffold739_size225380	114324	122778	-

Gene Structure

More details in Jbrowse Sequence

CDS

Actinostola_18944

ATGACCACCTCACCACAACGGCCACCTCTCCACAACAGCCACCACTCCACAATGACCACCACTCCACAATGGCCACCTCTCCACCACGGCCACCTCTCCATCATGGCCACCTCTCCACCACAGCCACCTCTCCACAACGGCCACCTCTCCACAACGGCCACCTCTCCACAACGGCCACCTCTCCACAACGGCCACATCTCCACAACGGCCACCACTCCACAACGGCCACCACTCCACAACGGCCACCTCTCCACCACGGCCACCACTCCACAACGGCCACCACTCCACAACGGCCACCATTTCTACAACGGCCACCTCTCCACAATGGCCACCTCTCCACAACGGCCACAATTCCACAATGGCCACATCTTCACAATGGCCACCTATCCACAACAGCCATCACTCCACAACGGCCACCTCTCCACAACAGCCACCTCTCATCAACAATGGCCACCTCTCCACAATGGCCACCTCTCCACCACGGCCACCTCTCCACCACGGCCACCTCTCCACCATGACCACCACTCCACAATGGCCACCTCTCCACCACGGCCACCTCTCCATCATGGCCACCTCTCCACCACAGCCACCTCTCCACAACGGCCACCTCTCCACAACGGCCACCTCTCCACAACGGCCACCTCTCCACAACGGCCACATCTCCACAACGGCCACCACTCCACAACGGCCACCTCTCCACCACGGCCACCACTCCACAACGGCCACCACTCCACAACGGCCACCATTCTACAACGGCCACCTCTCCACAATGGCCACCTCTCCACAACGGCCACAATTCCACAATGGCCACATCTTCACAATGGCCACCTATCCACAACAGCCATCACTCCACAACGGCCACCTCTCCACAACAGCCACCTCTCATCAACAATGGCCACCTCTCCACAATGGCCACCTCTCCACCACGGCCACCTCTCCACCACGGCCACCTCTCCACCATGGCCACCTCTCCACAACAGCCACCACTCCACAACGGCCACCACTCCACAATGGCCACCTCTCCACAACAGCCACCTCTCAACAACAACGGCCACCTCTCCACAACAGCCACCTCTCATCAACAATGGCCACCTCTCCACAATGGCCACCTCTCCACCACGGCCACCTCTCCACCACGGCCACCTCTCCACCATGACCACCACTCCACAATGGCCACCTCTCCACCACGGCCACCTCTCCATCATGGCCACCTCTCCACCACAACCACCTCTCCACAACGGCCACCTCTCCACAACGGCCACCTCTCCACAACGGCCACCTCTCCACAACGGCCACATCTCCACAACGGCCACCACTCCACAATGGCCACCACTCCACAACGGCCACCTCTCCACCACGGCCACCACTCCACAACGGCCACCACTCCACAACGGCCACCATTCTACAACGGCCACCTCTCCACAATGGCCACCTCTCCACAACGGCCACAATTCCACAATGGCCACATCTTCACAATGGCCACCTATCCACAACAGCCATCACTCCACAACGGCCACCTCTCCACAACAGCCACCTCTCATCAACAATGGCCACCTCTCCACAATGGCCACCTCTCCACCACGGCCACCTCTCCACCACGGCCACCACTCCACAACGGCCACCACTCCACAATGGCCACCTCTCCACAACAGCCACCTCTCAACAACAATGGCCACCTCTCCACCACGGCCACCTCTCCACATTGGCCACCTCTCCACAATGGCCACCTCTCCACAACAGCCACCTCTCCACAACAGCCACCTCTCATCAACAATGGCCACCTCTCCACAATGGCCACCTCTCCACAACGACCACCTCTCCACAACGGCTACTTCTCCACAATGGCCACCTCTCCACAATGGCCACCTCTCTCTCTCTGCTTATCAACACTTCTCGAGTGTTCGATCAGTCCCCAAACTTCAGAAGAAGGAACACAAAAAGAGGTCTATGGCCAGTATTCCTTTTACTCTTGCTGATGGCGTGGATATGGGAATCAATGTATATAACTTATGCAGGCCTGCTGTAAAGTCCAGTTGTGTCAATCTTAATAGTCGCACAAATGAGGAGGTCAAAATACACACTAAATACATTTGTAAGGATACAGGTTCAGAGTTAATGTCTACAGATATCAAATACTATCAGATGTTTGGAGGTGAAAAGGTTGTTTTTGAAAAGGAGGAAGTGGCCGCTATGAAGTCTTTTGGAAATCCAGGTCTTTTGTTGATGGGTTTTAAGCCCAAGAAGTCTTTGAAGAGATATTATCACATCAAATCTTCACATTTCATATTTCCTGATGAGAAGTCTGTGTCCGGTAGTACAACACTATACTCAGCACTCCTGACAAAGTCCCTGGAGAAAGACGTTGTTCCTATATGTAGATACATCCCGAGGACAGTCTCGGCTCCATATTTTGTAGCTCTTCTCCCACAGGTTGGTAGGCTAATGTATCATTATTATTACCATTGTCATCATGGCTGCCACAAGTAA

Transcript

Actinostola_18944

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02735	Ku	Ku70/Ku80 beta-barrel domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006164	Domain	Ku70/Ku80 beta-barrel domain	Interproscan
IPR016194	Homologous_superfamily	SPOC-like, C-terminal domain superfamily	Interproscan
IPR027388	Homologous_superfamily	Ku70, bridge and pillars domain superfamily	Interproscan
IPR047087	Domain	Ku70, core domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12604	KU AUTOANTIGEN DNA HELICASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000723	Biological Process	telomere maintenance	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0003690	Molecular Function	double-stranded DNA binding	Interproscan
GO:0006303	Biological Process	double-strand break repair via nonhomologous end joining	Interproscan
GO:0042162	Molecular Function	telomeric DNA binding	Interproscan
GO:0043564	Cellular Component	Ku70:Ku80 complex	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-