Gene detail

Detailed information of Actinostola_17513 in Actinostola sp. Cb2023 Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Actinostola_17513	E3 UFM1-PROTEIN LIGASE 1	scaffold592_size270550	14293	24141	-

Gene Structure

More details in Jbrowse Sequence

CDS

Actinostola_17513

ATGGCGGATTGGGAAGAAATCAAAAGACTTGCGGCCGACTTTCAACGCGTTCAGATCACAAGCACAGCTCATAAACTATCGGAAAGAAACTGCGTAGAGATAGTGCAAAAGCTGATTAATCTAAAACTGATCGAAGTTATTTATACAACCGATGGAAAAGAATATCTGACTCCACAACAACTAGAGAAGGAAATCAAAGACGAACTGTTCGTCCATGGAGGAAGAATAAACTTGGTGGATATTCAGCAGGCCATTAATGTTGACCTGACTCATGTTGAAAATAAAGTTGGTGAAATTCTTAGACATGACAGGAACCTTGTACTCATACAAGGAGAGATCATTGACAGGGATTACCTTGATAGAATGGCTGAAGAAATCAATGAAACCCTACAAGAATCAGGTCAAGTGTTTATTGCTGAACTCAGTAAGAGTTTTACTTTGCCAACAGATTATGTTCTTGAGGTGGTTGAGTCAAGACTAGGGTCTATAATTCATGGTCAGTTGGATCAGATGGATAGGAATGTCCTCTTTACTCATGCCTTTGTGGCCAGGCAAACTGCTCGTATACGAGGTGTACTGACAGCTATTACAAGACCTACTCAGCTTTCATCACTCATTGGACAGTATGGCTTTCAAGAGAAACTATTCTACGTCAGTGTGGGATTGTACATTGTAGGTTGCATTGGTGATTTGTTGTCCAATGAACGCATTGTTGGCTCTACACAAGGAAGGCAAGATAAGGTTTCATTTGTACCAGATATCTACACACAAAGTCAGAATAGTTGGGTTGATGACTTCTTTAAACAGAATGGTTACATTGAGTATGATGCACTAACAAGACTGGGTATCACAGATGGCAAGCAGTTTCTAAAGAGACGTTACCATAACAACGAACTGTTCCTGCCAACTTGTTGTGTTGGTCAGCTACTACAAGACAATGTCCATGCTACCATAGATGAAGGGCTGTCTACCACAGGATGGATTGATGTCATGCCTCTTTTACCCACTCCATTTACTGGTGAAGACGCTAATCAATTTGTTCAAAGCTATCTCAAGGTGTCAGGAAGGACCACAGCACATGTCTTCTGTGACAGCTTCGTTGCCAGTGAAGAGTTTATTGAAACTTGTAAAGTACCTTTTGAGAAAATCATGCAAACCAAGGCAGCGAAGGACGCTGCTGAATCACCTGCCTTACTATCAGAACTCTCCAAGCGAGACATGGCCAACATGAAGGGGTCGGGGAGTGCTGCTGATCGACGGGAATCCAAGAAAGAGGAACGTCTTAAAAGGGCGACTACTGGAAGCAAGGGAGGGGGGAGTGTTGGAGGACGAGGTGGACGAGAGACTAAAACAAGGAAGGTCAAAGACAAGAGATATAAAGGTGGTAAGAATGAGGAAGCTGATGACTCGGCAGATTTTACAGAGAGAAATACACATTCTGATGAGCTACAGTTTATGAATATCGAGCAGATCACAGAAATTTTACAGAATAACAACAAGGAGTGTGACGAAGAGTTTATGACTGAGGTTGCTGGACAGTTGTACAGACCGCTGACCCGTAGTTACCAGCAAGTAGTGCGCACAATACTTCAGACTTCCGGTGACAAGAAGAGAAAAAGTCATGCCGAAGTACAAGAAAAGGTTAACACCCTGTGGTGTAGTGCCAAGGTCTTCGAGAAAGGGATTCAATTATTTGATGATGATGTACAAGTCCACCTTTCAAGGCACTTACTGCGTACTGTATGCACGGATATAGCGAATCTAGCCGTCAATATGCTAGCCGCTGACCACATGCTTGCTGTCACAGACGAGACTACACTTACACCAGAGAATCGCATGAAGATCATTACAAAAATGCCCGAGCAGATCAAAGCTCCTCTCATCAAGTTGAATTCTTCGTTAAATGGAAAGGAGACGTCGGAGTTCTTCAATCAATTCGACGTTGTTTCAGGGCCTGGGTTGTGTGAGTTCATGATTAAAAAGTTGGACAAGAAAAAAGAA

Transcript

Actinostola_17513

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF09743	E3_UFM1_ligase	E3 UFM1-protein ligase 1	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR018611	Family	E3 UFM1-protein ligase 1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31057	E3 UFM1-PROTEIN LIGASE 1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005789	Cellular Component	endoplasmic reticulum membrane	Interproscan
GO:0032434	Biological Process	regulation of proteasomal ubiquitin-dependent protein catabolic process	Interproscan
GO:0034976	Biological Process	response to endoplasmic reticulum stress	Interproscan
GO:0061666	Molecular Function	UFM1 ligase activity	Interproscan
GO:0071568	Molecular Function	UFM1 transferase activity	Interproscan
GO:0071569	Biological Process	protein ufmylation	Interproscan
GO:1990592	Biological Process	protein K69-linked ufmylation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-