Gene detail

Detailed information of Actinostola_17160 in Actinostola sp. Cb2023 Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Actinostola_17160	CONTACTIN 5	scaffold55_size824523	281080	302065	-

Gene Structure

More details in Jbrowse Sequence

CDS

Actinostola_17160

CCACCTACTCCAAGTGTATCACCCAAACACGTGAGCATCATTGGTCTCAATAAGGCTACAAACCTGACTTGTGTTGCTACGGGACTTCAAATTAAGAGTGTGGTCTGGTTTAAAGGTTCAGGAATATTTCTGGGTCAAGGTTTTCTAAACTTCGTTGTTGCTTTAGGCAGCTCAATAGATTTAGAATGCAAAGCGTCCATCGTACCTGGGTCTGAGATTTCACTAGAACTCAGTACCTTATATAAAATCATTACCATTGTCTCGGATGGAAAGCAAGTAATCAAAAAAGGCAACATCTTCACTATCCATGGCATTGATCGTGACAAAGCTGGTGATGTATTTTGTAAGACGACATCCCGTTGTGGTGGACAAGCCACAGGGTATAAGATTGGTCGATTGGTTCCTGTGGTCCTACCCAATGCTTTGACTCCAAGACCAACACTAAAGCCTGGCAAGCAAACCTTGTACCGCAGTGAACTAAACAATGGCGTACAGTACCAATGTTTGGTGAATCCTGTCCCTGTGAAGACGTTCGCGTGGTTTGTGGATGGCAAACGAATAGACGACAAAGACGTTCAAGCTTCCAGCGACAGGAAACACAGTAATTTGACGGTAACTGAAAAGTACTGTGCATCGAGTAAATGCAGCATTGAGTGTCGTGTAACCAGTAATGGCGCCGGCTATTGGTACTCGACTACACAGCTTACAATAAAAGAATCGACGATTTATACAATTCAGCCTCCCCGTGCACAGCGTATAGATGAATATAAGTCAGCGCTCGTTCCATGCCCCGCCCAATTCACACCAATCTACCAAAGTACTAGTAAAGGACGAACACCGAGATATCCTGATGGAATTAAAATCAAATGGACTGGAAATTCCTTTGAAATCCGATGGTTTGACAACAATGACGTTGGAGAATACTATTGTGATGTTAATAACATGTCTCCAATGGCTGCATTTAGCATTCGAGGTAAGAATATCGTATCCAGAATATCACGGGCGGATCCAGAATATCACGGGCGGATCCAGAATATCACGGGCGGATCCAGGATATCACGGGCGGATCCAGAATATCACGGGCGGATCCAGAATATCACGGGCGGATCCAGAATATCACGGGCGGATCCAGAATATCACGGGCGGATCCAGAATATCACGGGCGGATCCAGAGATTTTGCAAAGAGGGGGGCGCGTTCAGATTATATATTTCAGATCTGTAATCGACTGTGTTCTTTAGCTATAGGGCCGCCGATGGGAGGAGTTTCGGTGAAAATCGCATCACCAAACGAGATAACTGTCGAGTTTAATGGCGGAACGAATCTGCTTTGCTACACCAGTTCTCAGTCTTCCTCTTTGGTTTGGACAAAAACAGATTTAAAAGGAAGTCAGGTAACCGTTACTGGACCAAAAACCACTCAAAGTGGCTCCAGGGCTCAAAGTGTTCTGGAATTAAGGAATGTCAGTAAACTGGACGAAGGAACCTATACGTGTAGTTTGGCCGTTGGTAGACTGGTTCGCACTGCGTCGGTAAAGGTCAATGTTAAAGATGTCTCCAAACCCATTGTCGTCGCCAACTCATCCAAGATTATTACCAAGGAAAACAAACATGTCAAAATGTCATGTGTGGTCAGCAGTTCTCCTGGTCCTGCCGTCGTCTGGTTTAAGGATGGGAAACAGTTATCACAATGTAACCTTTTCTTTGGGTCCATCTTGTGCTCTAGTTCAATCCAAGACTATAATACCTCGTATTTCAATGGAGTATACACCCTGACAATAAGGAATGTCAGTCATGAATCTAATGACGGGAAGTATGAATGTGTTGCTACTAACGTGGCAGGGAAAGCAAGAGCTAGCATTGTGGTTACTGTGTACGGTAAGTACGTACATCATCATCATCATCGAGAACATTCTACATCAACGTACAACAAAACGTACAGCAACAACAGCAGCGGCACCATCACAATCACCACTACAACAATCACCTCCAACAACATCAACAACAACACCATCACAATCACCACCACCACAATCACCTCCAACAACAACATCAACAACAGCAGCAGCACCATCACAATCACCACTACAACAATCACCTCCAACAACATCAACAACAACACCATCACAATCACCACTACAACAATCACCTCCAACAACAACATCAACAACAGCAGCAGCACCATCACAATCACCACTACAACAATCACCTCCAACAACAACATCAACAACAACAATCACCATCACCACAAACAACAACAACATCAACAACAACAGCAGCAGCACCATCACAATCACCACTACAACAATCACCTCCAACAACATCAACAACAACACCATCACAATCACCACTACCACAATCACCTCCAACAACATCAACAACATCAACAGCAGCAGCACCATCACAATCACCACTATATCAAGCCTAAGCTGTACAAACAATCAGCCTTGATCGATCACGTGGTTGCCAAGCCCACCAAGCACGTGCATCTACCATGCACCATACAACATGGTAACCCAACCCCTACCTTTACCTGGTACCAGGCCTCCTCATCCATGTGTAATGATCGTGATTACAATTGTAAACCACAAGACAACCAATGGCAAAAGATCAGTTCGTCTGTGACTGACCCTATGATATCATCTCCACGGAACGACACGGTATTTTATAAGTGCACAGCAACTAATGCAGTAGGACAAGATTCTGTCGTGTTTTCTGTTGTAAGAATGGAATCACCAAAGCTTGTAAAACAAGGCGAAATCGCTTCGTACTATGCAGCATTCACTGTCCACAGATCCCTTGTGATCGATATACTTAGTGGGAACCCCCCACCCCACTACCGATGGTTCACACAGCGAGCAGATCATTGCATTACATCACAAGGGATCTGTAAACCACGCTCTAAACGATGGATTCGAAGCAATCATGACGTGTCACCACCTCCAGGAACCTCGTCTTTACGAAGTGTCATCTCACTACCGCCAACTGCACGAGCATTCTTCTACAAAGTAGAGGCTGTCAATGTGGTGGGGAGTGATAGTCAAGTCTTCTCTGTTGTCAGGATATGGGAACAAGTTCCTGAGATAACCACACCTCAAGGCCAACTATTTGACGAAGGAGACATCATTCAAATACAGTGCAAAGCCAAACAATACGACTTTCAAGCTTTGGACATACAGAGAAAAGACGGACAACCGTTACCTACAAATAGGACGAAGACTGTAACAAACATTGTTGATAATGATATGATGATGATGACACTTTTGATTGACCACGTCACCCTGGACGACGGAGGAGTGTATGGTTGCCTGGGATACAACGAAAACAGTACCAGTCCTACAGCAGCAGTCAATATCAACGTTACAGCTACTGTGCCTCCAGTCGTCTCCTTATCAAACAAGACAACACTAAGTACTGTGGAACAAGTCAGCCTTCACTGTCACGTGATATCCGGGCATCCCAAACCAAAGATCACGTGGTATAGAAATGGTCTTCCTATTCAGTTGAAGCCGTTAGGTCCTGAAGGCAACTGTTCCTCATTTGTCAATGGATTTTATCATCTACACGATTTCAAAGCCTCTCATTCTGAGTATTTAGTAGTGTGTGATCCCAAGCACGAGCTGAATAGTGGCTGGTACACTTGCAAAGCTGAGAATAGCAAAGGAAAAGCCAGTGCAGTCAGCAAGTATTTGAATATTCACGAGGCACCTTCAGTCCGCCTTGTACCAGACGGTTCTTTGATATCAATAGAATATGGAGACAGACTTCAGGTCACGTGTTTAGCTAAAGGGAATCCTGAGCCCACGATCACTTGGGTCAAGAAAACGGATGATGGAAAAGAATATTCCGTTAACTCAAAGGACATACGTGACGTCAAAAGTGGTACAATGATACTCGTACGGTCTGTGGATGACACACACTATGGTGTGTACGCCTGTCATGCTAATAATGTGTATGGTAATGCGTCGATCAGTGTATCAGTAGGGAATCCCGTCATTCTACAGAGACAACAGCCTGCTCCCAAGAGCCATCTAATAGCTGCAATCATAGTTAGTGTGGTGCTTCTATTTTTCCTCATCGTGTTCGCTGTAATCCTCTATCGACGCAGGCAAATGTACGGAGGCTTTTACCTCTGCGCCACTCCTCCTCTACCAGACTTGATCAAAAGCCTGGATCCTACTTCTCCATTGATTGAACAAGTGCACAAGTTACCATACGATCCTGTGTGGGAGTACCCTAGGGGAAATCTTGTCTTTCGTGATGTCCTTGGAACAGGTGCATTTGGTAAAGTATACTTAGCAGAAACCGAGAGTTTCTTAGTCGTAGATGACACCTCTTCTGTAAGCTCAAGACACAGGTTAGCAAAGAGAAAGGATTATAGAAGAGCGTCTTCCTCGTCCGCAAAGCCTGGAACTTTGAAAGTGGCTGTTAAAAGCCTGAAAGAAAACGCCATTGAATCTGACCACAACGACCTCTTGTCTGAGCTTAAGATTTTAATTCATGTGGGAGCACATAAAAATATAGTCAATTTACTTGGTGCTTGTACTAAAGGACCCAAGCAAGATCTATGGGTCATTATAGAGTACTGTCAATATGGCGATCTAATGCATTATTTGAAAGATAAACGCGACATCCATGAACCTACCTGGGAGCCTCCAACAGACGACCCTAAGGTCCAGTTCTCCTTGACAGAGCTCGTTAGCGCGACATATCAGGTTGCGAGGGGAATGGAATTCCTGACTTCAAGAAGGTTGGTCGTTTGGCATTCTCATGTGGGAAATTTTTACCCTGGTCATACCTTGATGAAAGAATGTTGGATGCATGGTCCAGACGATCGGCCAACATTCAAAGATCTGGTTATTGCACTTGACAAGGCCATTGAATGTAATGCAATGGGAAGAGAGGCGTATCTAGAACTGGATAATTTGGAAAACTTGAAAGATGAAAACTACAATAAAGACATTGATGGTTACTTACAACCATCTGACATCATGCCACTACACAAGACATCACAAGAAAACACACCCTGTATCGATGAGCCTCACCTTTACTCAGAGATTCCTGACATCAGTACACCTGTTACCAATGGAGACATTAAGACCAAGGATTTCAACGACATGGAAGAAAAAGAGAGCTTGCTCAAGAAACCGTGCGAGTATGAAATGGCTATGAAATGTCCACGATATGTTAATTTCAGCGATGCCGATAATTCTACCACAACTATGCTT

Transcript

Actinostola_17160

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00047	ig	Immunoglobulin domain	Domain	Interproscan
PF07679	I-set	Immunoglobulin I-set domain	Domain	Interproscan
PF07714	PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	Domain	Interproscan
PF13927	Ig_3	Immunoglobulin domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000719	Domain	Protein kinase domain	Interproscan
IPR001245	Domain	Serine-threonine/tyrosine-protein kinase, catalytic domain	Interproscan
IPR001824	Conserved_site	Tyrosine-protein kinase, receptor class III, conserved site	Interproscan
IPR003598	Domain	Immunoglobulin subtype 2	Interproscan
IPR003599	Domain	Immunoglobulin subtype	Interproscan
IPR007110	Domain	Immunoglobulin-like domain	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR013098	Domain	Immunoglobulin I-set	Interproscan
IPR013151	Domain	Immunoglobulin	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR036179	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR050958	Family	Cell Adhesion and Cytoskeletal Organization	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45080	CONTACTIN 5	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0004714	Molecular Function	transmembrane receptor protein tyrosine kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0007156	Biological Process	homophilic cell adhesion via plasma membrane adhesion molecules	Interproscan
GO:0007169	Biological Process	cell surface receptor protein tyrosine kinase signaling pathway	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-