Gene detail

Detailed information of Actinostola_17024 in Actinostola sp. Cb2023 Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Actinostola_17024	VOLTAGE-GATED POTASSIUM CHANNEL	scaffold544_size283834	255756	267060	+

Gene Structure

More details in Jbrowse Sequence

CDS

Actinostola_17024

ATGCTGACAGTGGTGCTTTCACTAGTCCTGGAGGAGCTGGCGGCTACTATAACAACACCAAAATGTACTTGGGAAATTCAAGGTCCCCATTCTGCAACGATCAAAATGTTTTTTCGAGACTTTGACGTGGAACCGAGTAAAAACTGTATTCCCTATGACAGCGTGATCGTAAGGGAGAACTGTAATGGGACCTGGTCAAACAACCTCGCTGGTAATCCTGATGTTGAGGCATACTGTGGCAACAGGACTGAATTCAATATCACTTCAAACTGTGGCCGAGTTAGGATTGAATTTAAATCAGACGACTCGGTAACGGGAAAAGGGTTCAACGTGTCGTACCAAATACACAGGGAATTCAAGAAGCCAGTAATCATACGTCTTGGTCAAGGATACAACGACACCCAGGAAGAGATTGCAGAAAGTGACATTCAAATCGACTGTGTGTCGGATGGTTATCCCCCACCGAAAATCTTCTGGAGTAGAGACAACGGTCCTTTGCCAGGGAATAGGCGCGCGGAATACAACGGCACTCTCCGCCTGTTTAACATTCGTGAGAGTGACTCTGGAAACTACGAGTGTTTTACCAATAATTCTATGGGATCTGATAGTAAGAAAGTGAAACTTGATGTTAAAGAGAAATGCACGTGCCCAAAGTACATCAAAACCAACTGGTACAGTCTACCGCCATACATGAAAGGCAAGGACGAGAAGAGCTTCAAAGAGAGCCTCTTTATGTTGCTTCTTGAACAAATCTTTCAGAGGTGTTGTGGCAACTGTTCCAACGGACACGGACCAAGTAAAATCCTGTTTACAGAACCTAATTCTCAGAAGGCTTCCCTGGTTGAAGTAAAGAATAACATCAAAACTAAAGAGACAATCTCCTTCCCAATCCCTGGTAAAAAGGACGACAATTCATACCAATCGTTCAAGTTTTTGTCCGTTGTCAGTTCGCCTGGTATTGCATTCATTGTGGTGAACGCCGAGCCAGGTTCTTCAGCGCGAGCTGTGTTCAACTCCGTCCTTGGTGGATGGCCGATATTGCTTCTTACAATGATTATGGCCCTTTTGTCTGGAATGATCATGTGGGCTCTCGACACGTGGTATAACCCGGATGAGTTCCCGCGCTCTTTTATCAAAGGTTCTGGAGAAGGCTTTTGGTGGGCTTTTGTTACCATGACAACAGTGGGTTACGGTGATCGCTCGCCACGTGGTTACTTAGCTCGTATTTTCGCCATTATTTGGGTTCTGGTCGGTATTGTCATCACGTCTATATTTACTGGAGTTGTCACTACTTCTCTGACTGCAATCACACTGTCAACAGACACACCTCTCTATGGAACAAGCATTATAGCTATTGCTAATTCTACAGAATACAAACTTGGGTTAAACAAAAACGCCAACATGTCAGTGGCCGGTGATCTGAAGACTTTGGCAGCCAAGCTTCTTGCTCGTTCCAACAAAGGCGCCCTTGTAGATACGTATGTCGCAGGAGAAGAGAAAGCCTTCAATAACACGCAATTGCGAGTTAGTAAGATCATCGATTACGATTCCCATTACGGTATCGTGTTCGGCGACGAGCCTGGACAGCCTTTAGCGAAGGGCACGTTTCAAACGTGTCTACAAGACTATGTTGCAGAGAAGAAAGCTGATTTCTACAAAATCATCGAGAAGAACACCAAGCCTCTAGAGAAACCAAAAGAAAGCCAAGCAGTCGAACGATCGTCTGGTTTGTTCGACGCAGACTCAGAACTGTTCAAGAGCTCGGTGTTTGTTTGTCTTGGATTGTTCTTGTTTCTGGCGGCCTGTGGGATTATTTGGGATTATGGTTATATGCGACGCTGGAGAGCGCAATCAGGACTAGATGAGCTGGAAATGATCGGCGGGCCGAGCTACGAGATTGCCAAGCGAAATATGGATATGATGGACTCCATGATGGCCGAGGTCCAGGAGTTTTATGATAACTGGAACCGACGCTTAGACGAAATGACCCAGAGACACGAAGACGAACATAAACTTGTATCCAAATATCAATCTAAATAG

Transcript

Actinostola_17024

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00431	CUB	CUB domain	Domain	Interproscan
PF07885	Ion_trans_2	Ion channel	Family	Interproscan
PF13927	Ig_3	Immunoglobulin domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000859	Domain	CUB domain	Interproscan
IPR003598	Domain	Immunoglobulin subtype 2	Interproscan
IPR003599	Domain	Immunoglobulin subtype	Interproscan
IPR007110	Domain	Immunoglobulin-like domain	Interproscan
IPR013099	Domain	Potassium channel domain	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR035914	Homologous_superfamily	Spermadhesin, CUB domain superfamily	Interproscan
IPR036179	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11537	VOLTAGE-GATED POTASSIUM CHANNEL	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005249	Molecular Function	voltage-gated potassium channel activity	Interproscan
GO:0005251	Molecular Function	delayed rectifier potassium channel activity	Interproscan
GO:0008076	Cellular Component	voltage-gated potassium channel complex	Interproscan
GO:0016021	Cellular Component	membrane	Interproscan
GO:0071805	Biological Process	potassium ion transmembrane transport	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-