| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Actinostola_16035 | DNA LIGASE | scaffold457_size321615 | 4611 | 17680 | - |
| CDS | |||||
| Actinostola_16035 | |||||
| Transcript |
| Actinostola_16035 |
| Protein |
| Actinostola_16035 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00644 | PARP | Poly(ADP-ribose) polymerase catalytic domain | Family | Interproscan |
| PF00645 | zf-PARP | Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region | Domain | Interproscan |
| PF05406 | WGR | WGR domain | Domain | Interproscan |
| PF08063 | PADR1_Zn_ribbon | PADR1 domain, zinc ribbon fold | Domain | Interproscan |
| PF21728 | PADR1_N | PADR1, N-terminal helical domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001510 | Domain | Zinc finger, PARP-type | Interproscan |
| IPR003034 | Domain | SAP domain | Interproscan |
| IPR008893 | Domain | WGR domain | Interproscan |
| IPR012317 | Domain | Poly(ADP-ribose) polymerase, catalytic domain | Interproscan |
| IPR012982 | Domain | PARP1-like, PADR1 domain, zinc ribbon fold | Interproscan |
| IPR036616 | Homologous_superfamily | Poly(ADP-ribose) polymerase, regulatory domain superfamily | Interproscan |
| IPR036930 | Homologous_superfamily | WGR domain superfamily | Interproscan |
| IPR036957 | Homologous_superfamily | Zinc finger, PARP-type superfamily | Interproscan |
| IPR049296 | Domain | PARP1-like, PADR1 domain, N-terminal helical subdomain | Interproscan |
| IPR050800 | Family | ADP-ribosyltransferase diphtheria toxin-like | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10459 | DNA LIGASE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003677 | Molecular Function | DNA binding | Interproscan |
| GO:0003950 | Molecular Function | NAD+-protein poly-ADP-ribosyltransferase activity | Interproscan |
| GO:0005730 | Cellular Component | nucleolus | Interproscan |
| GO:0006302 | Biological Process | double-strand break repair | Interproscan |
| GO:0008270 | Molecular Function | zinc ion binding | Interproscan |
| GO:0070212 | Biological Process | protein poly-ADP-ribosylation | Interproscan |
| GO:1990404 | Molecular Function | NAD+-protein ADP-ribosyltransferase activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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