Detailed information of Actinostola_16019 in Actinostola sp. Cb2023 Gene info
Gene IDAnnotationScaffoldStartEndStrand
Actinostola_16019UBIQUILINscaffold456_size321920220940241247+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyULD|UBL|NEDD8
Ubiquitin FamilyULD|UFD/UBQ|UBQ_Other
Ubiquitin FamilyULD|UFD/UBQ|UBQ_PIM

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00240ubiquitinUbiquitin familyDomainInterproscan
PF17976zf-RING_12RING/Ubox like zinc-binding domainDomainInterproscan
PF17978zf-RING_14RING/Ubox like zinc-binding domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000626DomainUbiquitin-like domainInterproscan
IPR003977FamilyE3 ubiquitin-protein ligase parkinInterproscan
IPR015496FamilyUbiquilinInterproscan
IPR029071Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan
IPR041170DomainRING/Ubox-like zinc-binding domainInterproscan
IPR041565DomainParkin, RING/Ubox like zinc-binding domainInterproscan
IPR047535DomainE3 ubiquitin-protein ligase parkin, RING finger, HC subclassInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR10677UBIQUILINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006511Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0031593Molecular Functionpolyubiquitin modification-dependent protein bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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