Gene detail

Detailed information of Actinostola_15103 in Actinostola sp. Cb2023 Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Actinostola_15103	DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 FAMILY MEMBER	scaffold394_size356266	120795	128697	+

Gene Structure

More details in Jbrowse Sequence

CDS

Actinostola_15103

CAAGCAACTGTAACATGGAACTTTGCTCTAGAAGACTATAAAAGATTTATATCAGCAGTGAAACCCTTACAGCCAGGTGTACACATAGAAGGCTTACCCAAACCTGTTTTGTCAGTATTCACAACTACAACACCAGGAACTCTTAAGGAATTAGCAACACAAGATATCAATCTTAACTCTGTAGACTCCAAACTGATCTCAGCTCTGATGCCATTCCAGAAACAGGGTGCATTTATCAGATGGCTGCCATCAGTTGATCCACAGGATATCAATGTAGTATTAACAGGCAAAGATAAACCTATGTCAGGACTGGTCAACATTATTAGCTACGATTTATTGTCAAAATTTATTGAACAGCTCAAGTCTAAATCAATCAGGGTTATTATTGCTGATGAAAGTCACTTCATCAAGAATTACAAAGCAGCCAGAACAAAAGTTGCTTTACCACTAATGAAGACAGCGACTCGAGTTATTCTTCTGTCAGGAACTCCTGCTTTGTCGAGACCCATGGAGCTGTACACCCAAATATGTGCCGTGAAACCCAGGTTATTTCCATCTTTTCATGAATTTGGTTTACGTTATTGCGGTGCTGTTGAGGATAAAGATCAGCATGGAGCTTTACTGAACTATTTCTATGAATCATGTGCATCGAAAATAGCAGCCGTAAAAAGCGCAGGCAGGACTGCAGGCAGGACTGCAGGCAGGAGCTCAGGCAGGAGCACAGGCAGAAGCGCAGGCAGGAGTGCAGGCAGAAATGCAGACAGGAGCTCAGGCAGGAGCTCAGGCAGGAGTGCAGGCAGGAGCGCAGGCAGGAGCGCAGGCAGGAACGCAGGCAGGAGAGCAGGCAGGAGCACAGGCAGGAGCGCAGGCAGGAGCGCAGGCAGGAGCGCAGGCAGGAGCGCAGGCAGGAGCGCAGGCAGGAGCGCAGGCAGGAGCGCAGGCAGGAGCGCAGGCAGATATGCAGACAAGAGCTCGGATAGGAGCTTAGACAGGAGCTTAGCAGGAGTGCAGGCAGGAGCACGGGCAGGAGTGTGGGCAGGAGCGCAGACAGGAGCATGGGCAGGAAGGAGCACGGGCAGGAGCGCAGGCAGGAGCATGGGCAGGAAGGAGCACGGGCAGGAAGCAGCACGGGCAGGAGCATGGGCAGGAGCATGGGCAGGAGCATGGGCAGGAGCATGGGCAGGAGCATGGGCAGGAGCATGGGCAGGAGCATGGGCAGGAGCATGGGCAGGAGCATGGGCAGGAGCATGGGCAGGAGCATGGGCAGGAGCATGGGCAGGAGCATGGGCAGGAGCATGGGCAGGAAGGAGCACGGGCAGGAGCATGGGCAGGAGCATGGGCATGGGCAGGAGCACAGGCAGGAGCATGGGCAGGTGCATGGGCAGGAAGGAGCACAGGCAGGAGTGCAAGCAAAAGCACATACAGAAGCGCAGGCAGAAGCGCAGGCAGAAGAGCAAGCACAAGCGCAGGCAGAAGCACAGGCAGAAGCGCAGGCAGGAGCACAGGCAGAGGCAGAAGCAGAGGCACAGGCACATTTCAGATAACCTAAGCGCAGGCAGAGGCACAGGCACAGGCAGAAGTGCAAGCGCAGGCAGAAGTGCAAGCGCAGGCAGAAGCGCAGGCAGAAGCGCAGGCAGAAGAGCAAGCACAGGCACAAGCGCAGGCACAAGCGCAGGCACAAGCGCAGGCACAAGCACCGGCAGAAGTGCAGGCAGAAGTCTTACGCTGACCGAAGGTACTGCTGTCGTATTTGCAGAGCTATTCTGGAATCCTGGTGCGCTGGTTCAAGCAGAAGATCGAGTCTACAGAATTGGACAGAAAAACGCCGTCAATATACATTATCTTGTGGCAAAAGGGACTGCTGACGATTACTTGTGGCCTCTTGTTCAGGGTAAACTCGAGGTGTTGAGCAAGGCTGGACTTGGCGGCGACGATTTTTCCAATGCAGATATGACAACTTTTAAGGACCCTAAACAGAAAACCTTGATCTCGTGTTTCGAATCTTTGATCGAGGAAAACGAAGAAATGAACACAAGTTTACCACTTGAACCCGAAACTACGGAGCCTACGTCATCGACACGTCATTCCACAGTAACCATAGCAACTGACACTGAAATCTCAGCAAATGATGGAATGGATGAAGACAATAGTGAAGGCTGGTTTGTTAGTTTGGATAACGATACGCCATACAGAGGTGGGAAGGCTAGGAAAGTAAATGACGGGGACTCTGAACCATTGGCTAAGCGATCAAAAAGGAAATAA

Transcript

Actinostola_15103

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00176	SNF2-rel_dom	SNF2-related domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000330	Domain	SNF2, N-terminal	Interproscan
IPR014001	Domain	Helicase superfamily 1/2, ATP-binding domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR038718	Homologous_superfamily	SNF2-like, N-terminal domain superfamily	Interproscan
IPR049730	Domain	SNF2/RAD5-like, C-terminal helicase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45766	DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006281	Biological Process	DNA repair	Interproscan
GO:0031297	Biological Process	replication fork processing	Interproscan
GO:0048478	Biological Process	obsolete replication fork protection	Interproscan
GO:0140658	Molecular Function	ATP-dependent chromatin remodeler activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-