Gene detail

Detailed information of Actinostola_13633 in Actinostola sp. Cb2023 Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Actinostola_13633	PEPTIDYLPROLYL ISOMERASE	scaffold29_size1054737	412618	424236	-

Gene Structure

More details in Jbrowse Sequence

CDS

Actinostola_13633

ATGGCGACTGCTTCACAATCTGACTTCACTTCAGCTGCAAAGCCAAAGGACGACAAATTGGAACCAGACGACGAAACCATGGGAAATATGAACGGTAACTTAGAAATAGATCCTCTACTTAAAGACAAACATGATTTAGAAGCGCCAGAAAGTGTACAACGTGAAGACAAAGTTAGCAGTTTGGAAAATGGCCAACACGAACTTTCGCCATTGTCATTGAATGGCGAACAGCAACAACTAGATGGCGACAAAGAACCGTTTCCCATTGAAAGACGCAATGGAAGAACGACGAATGAAAGTCAAGAGGATGCAAAGTACGGAGAAAATGGAGAGTCTGAAAATACTGACTGTAACAACACAGCGTGCAAGGAGGCCTTGATTAACTCCGACAATGACGAAAACGAAGGTAAAGATGATAAGATTGTCAATACAAGCCAGGAAAAAACAGAGCACAATAATGATGAAAACGATAAATCGTCATCAGCACCAGAAGATATTGAGAAATCTTCAGGTTTTGAAACAAAGGAAACCCCTACACCCGGTCATATATCTCCACCCAAACACAGTCCAGACAGGGGGGTGCACCATTCAGGGGGGTGCCACAAGTTCCTTGATGAGGAGTCCAGAGCTGAATACATGAAAATCAAGTCTGAGGTCATAGGTGAGGCAGAAACCTCGGAGAGTGAAGATGAAGAGGAGTCGGCCACAGTGGAACACATCCACCCTGGAAGCCACAGCTCGCCCGATTCGAAAACAAAAGCAGAGTATAGAAAGATAAAATATGAAGTAACTGGGGAAGCATTGACGTCAGAAAGTGAAGACGAGAATACCGATGAAGGAGATGTTAGAAAACAATTGGCTGATGATGCGAAGAAAGAATCGTCATCTCAAGAGTGGTTGGATATTTTTGGAAATGGATTACTGAGAAGAAGAATACTACGCGCTGGTAAAGGTCGTCATACAAGACCAGAGAGGGGACAGGTTGTGATGCTGTGCACTGCAGGTCGTCTAGAGGATGGTACTCCTGTAGACTGGAATCAATGTTTGGAGTTTATTCTTGGGGAAGGAGAAGTAATACAGGCCTGGGATGTTGCTGTGGCTCTGATTGAACTCAATGAAGTATGTGAGTTGGTGACAGATGGACGATATGCTTATGGAGAGCAAGGCAGGGATGGTGACCATCCTATTCCAGCCAATGCTAAGATCACATATGAGATTGAATTACTAGCAGTGAGAGATGGCCCTGATATGGATACTATGCCTGATGAGGAAAGAATTAACATAGGTGACAAGAAGAGAGAGTTGGGGAACGACTTGTTTGTAAGAGGTGACTATTCTGCTGCCATCAACTGCTATCAAAGGTTTGTGAAAGTACAAGAACTTAAGATGAAATGCTGGAACAATCTTGCTGCAGCACAACTTAAGAAGGAACTTGTACTAGCCGAAGGCCTTAGTGATATCGGGATGACTGTCTTTGAAGTCTCTGAACAGCACACCGAGTCTCCGCCGGGCTACGCAGGCTACATCAATACCACCACTGCCATCATCATCACCACTATTGTAATCATCATCATCACCACCATTGTCACCACTATTGTCATCATCATCATCATTGCCATTGTCACCAGTATTGTCATCATCATCATCACTGTTACCATATCTTCCATATTATTTGTCATCATCATCATCAATACCACCACTGCCATCATCATCACCACTATTGTAATCATCATCATCATCACTGTTACCATATCTTCCATATTATTTGTCATCATCATCATCATCAATACCACCACTGCCATTATCATCACCACTATTGTCATCATCATCATCATCACTGTTACCATATCTTCCATATTATTTGTCATCATCATCATCATCAATACCACCACTGCCATTATCATCACCACTATTGTCATCATCATCATCACCACCATTGTCACCACTATTGTCATCATCATCATCATCACTGTTGCCATATCTTCCATATTATTTGTCATCATCATCAATACCACCACTGCCATTATCATCACCACTATTGTCATCATCATCACCACCATTGTCACCACTATTGTCATCATCATCATCATCACCATTGTCACCACTATTGTCATCATCATCATCATCACTGTTACCATATCTTCCATATTATTTGTCATCATCATCATCAATACCACCACTGCCATCATCATCACCACTATTGTCATCATCATCATCACCATTGTCACCACTATTGTCATCATCAGCATCATCACTGTTACCATATCTTCCATATTATTTGTCATCATCATCATCATCATCAATACCACCACTGCCATCATCATCACCACTATTGTCATCATCATCATCATCGCCATTATCACCACTATTGTCATCATCATCATCATCATTGTTACCATATCTTCCATATTATTTGTCATCATCATCATCATCATCAATACCACCACTGCCATTATCATCACCACTATTGTCATCATCACCACCATTGTCACCAGTATTGTCATCATCATCATCACTGTTGCCATATCTTCCATATTATTTGTCATCATCATCATCAATACCACCACTGCCATTATCATCACCACTATTGTCATCATCATCATCACCACCATTGTCACCACTATTGTCATCATCATCATCATTGCCATTGTCACCACTATTGTCATCATCATCATCACTGTTACCATATCTTCCATATTATTTGTCATCATCATCATCAATACCACCACTGCCATTATCATCACCACTATTGTCATCATCATCATCATCGCCATTGTCACCACTATTGTCATCGTCATCATCATCACTGTTACCATATCTTCCATATTATTTGTCATCATCATCATCATCAATACCACCACTGCCATCATCATCACCACTATAGTCATCATCATCATCACCATTGTCACCACTATTGTCATCATCATCATCACCACTATTGTCATCATCACCATTGTCACCACTATTGTCATCATCATCATCATACCATATCTTCCATATTATTTTATTGTCATCATCATCATCATCACTGTTACCATATCTTCCATATTATTTGTTATCATCATCATCATCATCATCAATACCACCACTGCCATCATCACCACTATTGTCATCATCATCACCACCATTGTCACCACTATTGTCATCATCATCATCCTCACCATTGTCACCAGTATTGTCATCATCATCATCATCACTGTTACCATATCTTCCATATTATTTGTTATCATCATCATCATCATCAATACCACCACTGCCATTATCATCACCACTATTGTCATCATCATCATCACCACCATTGTCACCACTATTGTCATCATCATCATCATCATCACTGTTACCATATCTTCCATATTATTTGTTATCATCATCATCATCATCAATACCACCACTGCCATCATCATCACCACCATTGTCACCACTATTGTCATCATCATCATCCTCACCATTGTCACCAGTATTGTCATCATCATCATCATCATCACTGTTACCATATCTTCCATATTATTTGTCATCATCATCATCAATACCACCACTGCCATTATCATCACCACTATTGTCATCATCATCACTGTTACCATATCTTCCATATTATTTGCCATCATCATCATCATCAATACCACCACTGCCATTGTCATCACCACTATTGTCATCATCATCATCACTGTTACCATATCTTCCGTATTATTTGTCATCATCATCATCAAAACCACCACTGCCATTATCATTATCACTATTGTCATCATCATCATTATCAAGGCCCACACAGCAGCCCTGACGTCTTGTATGCAGGTCCTAAGTATTGACCCTGATAATGTCAAAGCACTGTTTAGAAAAGGAAAGGTCCTGACTGCTCAAGGTGACCTACAACAAGCCATTACGTACGTCAAGAAAGCCAACCACAATGAACCTGGAAATAAAACCATTCGCAATGAACTCATAAACCTGAGACGGCAGCTTACTTCGCAGAACCAAAAGGAAAGGAACATGTACGAAAGGATGGTTGGAGGGCTGTCAGACAAGAATAAAAGCACCTCCAAACAATCAGTAAGTGATGCTACTATACTACACGAGTGCCTGATTTGTGTGGTATATAGCTAA

Transcript

Actinostola_13633

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00254	FKBP_C	FKBP-type peptidyl-prolyl cis-trans isomerase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000276	Family	G protein-coupled receptor, rhodopsin-like	Interproscan
IPR000515	Domain	ABC transporter type 1, transmembrane domain MetI-like	Interproscan
IPR001179	Domain	FKBP-type peptidyl-prolyl cis-trans isomerase domain	Interproscan
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR017452	Domain	GPCR, rhodopsin-like, 7TM	Interproscan
IPR019734	Repeat	Tetratricopeptide repeat	Interproscan
IPR046357	Homologous_superfamily	Peptidyl-prolyl cis-trans isomerase domain superfamily	Interproscan
IPR050754	Family	Immunophilin FKBP-type domain-containing protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46512	PEPTIDYLPROLYL ISOMERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003755	Molecular Function	peptidyl-prolyl cis-trans isomerase activity	Interproscan
GO:0004930	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005740	Cellular Component	mitochondrial envelope	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0006457	Biological Process	protein folding	Interproscan
GO:0007186	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0012505	Cellular Component	endomembrane system	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0043066	Biological Process	negative regulation of apoptotic process	Interproscan
GO:0044183	Molecular Function	protein folding chaperone	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-