Detailed information of Actinostola_10142 in Actinostola sp. Cb2023 Gene info
Gene IDAnnotationScaffoldStartEndStrand
Actinostola_10142TRANSIENT RECEPTOR POTENTIAL CHANNELscaffold146_size56338755116102959+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00520Ion_transIon transport proteinFamilyInterproscan
PF01612DNA_pol_A_exo13'-5' exonucleaseDomainInterproscan
PF01927Mut7-CMut7-C RNAse domainDomainInterproscan
PF08344TRP_2Transient receptor ion channel IIFamilyInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR002110RepeatAnkyrin repeatInterproscan
IPR002153FamilyTransient receptor potential channel, canonicalInterproscan
IPR002562Domain3'-5' exonuclease domainInterproscan
IPR002782DomainMut7-C RNAse domainInterproscan
IPR005821DomainIon transport domainInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR013555DomainTransient receptor ion channel domainInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR10117TRANSIENT RECEPTOR POTENTIAL CHANNELInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005216Molecular Functionmonoatomic ion channel activityInterproscan
GO:0005262Molecular Functioncalcium channel activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0006139Biological Processnucleobase-containing compound metabolic processInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0008408Molecular Function3'-5' exonuclease activityInterproscan
GO:0015279Molecular Functionstore-operated calcium channel activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0034703Cellular Componentcation channel complexInterproscan
GO:0051480Biological Processregulation of cytosolic calcium ion concentrationInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0070588Biological Processcalcium ion transmembrane transportInterproscan
GO:0070679Molecular Functioninositol 1,4,5 trisphosphate bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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