| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Actinostola_08238 | S-ADENOSYL-L-METHIONINE-DEPENDENT TRNA 4-DEMETHYLWYOSINE SYNTHASE | scaffold102_size639174 | 327404 | 337398 | - |
| CDS | |||||
| Actinostola_08238 | |||||
| Transcript |
| Actinostola_08238 |
| Protein |
| Actinostola_08238 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF04055 | Radical_SAM | Radical SAM superfamily | Domain | Interproscan |
| PF08608 | Wyosine_form | Wyosine base formation | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR007197 | Domain | Radical SAM | Interproscan |
| IPR013785 | Homologous_superfamily | Aldolase-type TIM barrel | Interproscan |
| IPR013917 | Domain | tRNA wybutosine-synthesis | Interproscan |
| IPR034556 | Family | S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13930 | S-ADENOSYL-L-METHIONINE-DEPENDENT TRNA 4-DEMETHYLWYOSINE SYNTHASE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003824 | Molecular Function | catalytic activity | Interproscan |
| GO:0008033 | Biological Process | tRNA processing | Interproscan |
| GO:0031591 | Biological Process | wybutosine biosynthetic process | Interproscan |
| GO:0051536 | Molecular Function | iron-sulfur cluster binding | Interproscan |
| GO:0051539 | Molecular Function | 4 iron, 4 sulfur cluster binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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