Gene detail

Detailed information of Actinostola_08048 in Actinostola sp. Cb2023 Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Actinostola_08048	DYNEIN HEAVY CHAIN	scaffold996_size171743	94359	126393	-

Gene Structure

More details in Jbrowse Sequence

CDS

Actinostola_08048

ATGGAATTGATTCTTGATGACGATGATAACATGCAATTCTACCCAGTCTTAAGTGACGTGGAAGGAGCTGTTCTACAAGTTGTCGACACAGTTGCCAGTACAATGCAAAGTGTTCCAACTGTTCAGTCGTGGCTGGCTGGTGGGAATACAGTCAATCATGTTGAAGCTAAAGTAGATGAAGCAGTTCTACAGCAGTGTAATGTGTTTTTAAAAGAAGCTGTCAAGCAAAACCTGGAACAGCCACTTGAATACCTGCACTCATTTGAAAAATATAACGATCTGGTTTCTGGCGAAGCAAGGAAAATGATCAATGAATTTATGACAACTGAGCATTCCTTTGAGGAGTACATTCAGGAAATTGACCGATATCGTACCTTGGCGCGTGAAATCAACGGCTTACCTACCATAGCATACTTTAACATGGTACAACTCTACTGTGATGACCTCAAGAGAGGCCTCGCTAGCAAAGCTAACAAATTTGCCGACGAACTGCTAAGTAAATTAGCCGAAGAACATCGATCAGAGAACAAGCGAATCATTGCTGAGTACGAGTCGATTAAGGAGAAAGCCCTACAAAGACCTGAAGACACCAAAGAGATGATTGAACTACAGAAGTTCATTCAAGAAGCAAAGACTAAAGGGCTTATCAAACTTGACAATGATATCAAGGTGAGTGATGATGATGCTGATGATGGTGATGTTAACAATGGTAGTGGAGCGGATGTGGTGTTAGTAATGATGATGGAGTATGATGATGGTGATGACATTAATGATGATACTGATGATGGTGGTGATGAAGGGGATGTGGTGTTAGTAATGATGATGGAGTATGATGATGGTGATGACATTAATGATGATACTGATGATGATGGTGATGAAAGGAAGCCATTTGAGTGTCACGGTACCGTAGGTTTATCTGCATACTTTTTGATTGGTTCAGAAAGGAAGCCATTTGAGTGTCACGGTACCATCGTTGCTGTTGCACAGAAGAAGAACGAGAGTGCATTGCTTGAAAAGCGAGAAAAGGTCATGCTAGAGTTGTCGAAACTCAACAGGCGCGTAGAAGAATTCAAAGAATGTGGTGATTTGGACATGATGACTCAATACATGAAAGACGTGCAATCCTTGCAAAAGAAGCTTGGCGAGTTGGTAGAGACTATTGGTTTTATTAACGAGGAGGAAGACTTGTTCAAGTGGGAGCGTACCGATTACCCTGAGGTGGAAGCCATCACCAAGTCTATAGAACCGTACCAGAAACTCTTCTCCGTGGTGGTCAAGTGGCAAAAGGTTGAGAAGAAATGGATGGACGGTGCTTTTCTGGAACTGAATGCAGAATCCACTGAAGCTGAAGTTGAAGATTTTGGTCGCGAAATGTACAAGAATGTGAAGATCTTCCAAGTGATGAAAAAGGATGCAGAGAAAGAGAAGAAGGCTGCAAGCCGTCGTATCAAAGACTCTAAGGATAAGGACGAAGAAAAAGTAGAACTCGCCGCAGTGAAAGTAGCACAAACAGTACAACAACAGATAAGAGACTTCAAGGAACACATCCCTGTCATTGGTATCATGTGTAACCCTGGTATTCGTACTCGTCACTGGAAGGCCATGTCGGACATTGTTGGTTTTGACGTCACGCCTGACTCGGGCTCAACGCTCCGCAAAGTGCTCAAATTCAATCTGGGGCCATTTTTGGACGAGCTTGAAGGAATAAGTGGCGGTGCTAGCAAGGAATTCTCATTAGAAAGAGCAATGTTACGCATGGAAGAAGAATGGGATACTGTAATATTTAACACTACACTGTATCGTGATACTGGAGTATCCATACTTGCTGCTGTAGACGAGATCCAGACCACACTAGACGACCAGATCGTCAAGACACAAACAATGAGAGGATCACCCTTCATTAAACCATTCGAAACTGAAATCAAAGCTTGGGAGGAGAGATTACTGAAAATGCAAGAGATCATCGACGAATGGCTCAAGGTACAAGCACAGTGGCTGTATCTAGAGCCTATCTTCAGCTCGGAAGACATCATGCAACAAATGCCTGAAGAAGGCAGAAAGTTTAAGACGGTCGATAGGAACTGGAGAGATATAATGAGCTTCGTTACGAAAGATCCAAAGGTCCTTCACGCTACTTCCATGGCTGGTATGTATGACCGCCTAAAGGACAGTAATGGCCTGCTTGATGAAATCAATAAGGGACTGAACGCTTACCTGGAAAAGAAACGACTGTTTTTCTCAAGGTTCTTTTTCCTGTCAAACGACGAGATGCTTGAGATCCTATCAGAAACCAAAGACCCTTACCGTGTACAACCACATCTGAAAAAGTGTTTCGAGGGCATCGCTAAGCTAGAATTCACTCCATCACTTGACATAACCAGTATGTTTAGCAGCGAAGGTGAAAAGGTCCCTCTAAGTGACATCATATCGACATCAGAGGCTCGTGGTGCCGTCGAGAAGTGGTTGCTACAAGTACAAGATGTCATGTTGATTAGTATCAATGATATCATTGAAAGATCTGTGCAGGGTTACGCAACCACTGATAGGAAAGACTGGGTCTTAAATTGGCCAGGGCAGATTGTGATCTGTGCGAGTCAAATCTACTGGACACAGGAAGTCCATGAAGCCATTCGTTCTGGTCCCAACGGGTTGAAGGAATACCACGAGACCCTAACAGCCCAATTGGAAGACATTGTCGTTCTGGTGCGAGGTAAACTGTCCAAGCAGAACCGTGTAACACTGGGTGCATTAGTGACTATTGATGTCCACGCTAGAGATGTAGTACATGACATAGCTAACAAAGGAGTTTCACAAGAGAATGACTTCAAATGGCTGTGTCAGCTGCGCTATTACTGGGAACAAGAAAAATGTATGGTACGAATTATCAACGCCTCTGTCAAATATGGCTGCGAATACCTTGGCAACTCAGGAAGACTTGTCATCACCCCCCTGACCGATCGATGTTACCGAACCCTAATGAGCGCGTTCCATTTAAATCTGGGGGGTGCACCAGAGGGTCCAGCAGGAACAGGCAAAACAGAGACTACAAAGGATTTGGCCAAAGCTCTCGCTATTCAGTGTGTGGTGTTCAACTGTTCCGATGGTCTTGATTACTTACAGATGGGCAAAGTGTTATTCCGTACCGTAGCGATGATGGTCCCTGACTACGCTCTTATTGGCGAGATTATGTTGTACTCCTATGGATTTCGTGATGCGCGCAACTTGTCTGTCAAGATTGTCACAACATATACGCTGTGCTCTGAACAGCTGTCCTCACAATTCCACTACGACTACGGTATGCGTGCAGTCAAGGCCGTCCTTGCAGCAGCCGGTAACCTAAAACTCAAATTCCCTAACGACGATGAGAACGTCTTGTTGCTACGGTCCATCATGGACGTGAACCTACCCAAGTTCTTGTCTCATGATATTCCTCTCTTTGAGGGAATTATCTCTGACTTGTTCCCTGGAGTCACTCTTCCTATGGCTGACTATGGAGTCTTCTTAGAAACTGTCCGAGAGGTTTGTAATAAAAAGAACATTCAGTTTGTTGACTTCTTTAGAGAGAAGATAATCCAGATGTACGAGATGATGATAGTCCGACACGGCTTTATGATGGTCGGCGATCCATTCTCTGGTAAGACTAGCGTTATCCAAACGCTTGCAGAGACCATGACTACCTTACATGAACGGGGATACGACGATGAAAACATTAACAAGGTTTGGTATCGTATTATTAACCCTAAGGCTATCACTATGGGTCAACTGTTTGGACAATTTGATCCCGTCTCACACGAGTGGACTGATGGTATCGTAGCAAACACCTTCCGTGAATACGCCACCGATCAGACAGAAATCCGTAAATGGGTCATATTTGATGGACCAATTGATACTCTGTGGATTGAGAGTATGAACACTGTATTGGACGACAATAAAAAGCCTGCTACAGTCAGCCGTTGTGGTATAGTTCCTTGCTCCGACAGCAATGTAGCACGCTCCCTGATGAACCTAGTGGAGATCATGTTGAAAGATGCCCACACAAGAAGACTCCAAGCATCTTAA

Transcript

Actinostola_08048

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08393	DHC_N2	Dynein heavy chain, N-terminal region 2	Family	Interproscan
PF12774	AAA_6	Hydrolytic ATP binding site of dynein motor region	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013602	Domain	Dynein heavy chain, linker	Interproscan
IPR026983	Family	Dynein heavy chain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR035699	Domain	Dynein heavy chain, hydrolytic ATP-binding dynein motor region	Interproscan
IPR042222	Homologous_superfamily	Dynein heavy chain, domain 2, N-terminal	Interproscan
IPR042228	Homologous_superfamily	Dynein heavy chain, linker, subdomain 3	Interproscan
IPR043157	Homologous_superfamily	Dynein heavy chain, AAA1 domain, small subdomain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45703	DYNEIN HEAVY CHAIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0007018	Biological Process	microtubule-based movement	Interproscan
GO:0030286	Cellular Component	dynein complex	Interproscan
GO:0045505	Molecular Function	dynein intermediate chain binding	Interproscan
GO:0051959	Molecular Function	dynein light intermediate chain binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-