Gene detail

Detailed information of Actinostola_07930 in Actinostola sp. Cb2023 Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Actinostola_07930	EGF-LIKE DOMAIN-CONTAINING PROTEIN	scaffold966_size177101	118371	159291	+

Gene Structure

More details in Jbrowse Sequence

CDS

Actinostola_07930

ATGTTGCAGAAAGTAGAAGGAGGCTGTGATATGCCCACCGCACGAGTAGAATTGATTATCAATGGTCTGACGATACTCAAGACAACTGGCAACTGTAAAGCCACGATGGCGCGAAAGTTTTGGAACACCGGTTCTCACATAGGCAAGATTGCCCAGATAAAGATTGTAGATGACAGTAGCGCTGCTCCTTGGGGATATGTTAGCTTTGATGACGTAAGAACGGCCAGTGGATGCCAAGAACTATCACCTTGCAAGAGCAACCACTCCTTATGTCTTGTCAAAAGCGACGAACAGAAAGAAGTCATGTGCCGCTGTCCGTCGAGCAATGTGGGACCTTTGCCTTGTGGGTCCAGCAACTACTGTAACATCAGTGGAGGAAACTGCCACAGTATTTGCACCACTGCCGACTGCGCATGTCAAGAATGTACTTGTTGGAATGGTTATCAATTCAATTCCAGCTCGCTACGATGCGACGACATCGACGAGTGTGCTAGAAACTCTGGTGGTTGCAAAGAGGGCTGCGTGAATACCTTAGGAGGATACCACTGCACTTGTCAGAAAGGGTATCGCCTGGACAAAGACAACAAGAGCTGTGTTGATATCGATGAATGTCTGGTTGACAATGCTGGGTGCGAGCATGCGGTGTGTACCAACATTCCTGGTAGCTTCGAATGCCTGTGTCTTCAGGGTTGGACCAGGAACGTCAGTGACCCGCTGCGATGCGTCGACCAGGACGAGTGTGCCGGTAATTTACTGTGTGATCCAACACAGACCTGTATTAATACCCTGGGGTCGTACCGGTGCGATTGTCAACCTGGATATCAAAACGACGCTTCGAATAAATGCGTTGACATCGACGAGTGCCAGACCCTAAACGGAGGCTGCGACCATACCTGCACCAATACCTTATCATCTTTCAAGTGTTCCTGTCATAATGGCTACCGACTGGCCTCCGATGGTAGGAACTGCTTAGACATAAACGAATGTGAGTCCAGCAACGGTGGTTGTCAGCAGCGTTGCCATAACAACGATGGAGGCTTTGAATGTGCTTGCAACCCTGGATACCGCCTTAGCAACGACAACGTCACGTGCGTTGACATGAACGAGTGTGACGCCGATTCCAAATGTACGCAGATGTGCACGAATGCAGTCGGTGGATATACGTGCTCGTGTCGCAATGGTTACAAGCTCCACTCGGACAACCACACTTGTTTAGATGTAGATGAATGTGGGATGAACAACGGCAACTGTGGTCACAAGTGTCATAACTTCCCAGGTGGTTACAATTGTTCCTGTAACCATGGTTACAATCTCCTTGACGACGGGTTGACTTGTAATGACGTCAATGAATGCCTTAGCAACAACCAGTGTCAGCAGTTGTGTACTAATAATGAAGGCAGCTTCACGTGTTCTTGCATTTCTGGTTATAAGCTGCAGGATGATGGCAAACTCTGCCAAGATGTCGATGAATGCGCAACAAAACCAGACGAACTCTGTCAACACGCATGCGCAAACACTCCTGGCAGCTATCAGTGCTTGTGTCCAGCGGGATACATTTTGAATGCTGACAACAAAACTTGCTCCGATGTAGACGAGTGCACGAACAATGCCACGTGTCAACACACGTGTACTAATCTGATTGGTTCGTATCAATGTAGCTGTTTCCATGGATACGCTCTTAATTCAAATAACAGATCGTGTACGGACATAGACGAATGCCTTCAAAAAGATGTCTGCGAGCACCAGTGCGTCAATACTGATGGGAGCCATCATTGCGCATGCTCTAATGGGTATAACCTCGCGTCTGATAAAAAGTCTTGTGTAGATGTAGATGAATGCAAAGATGGCAACGTTTGCCAAGACGAATGTACCAATACAAAAGGAAGCTTCAAGTGTTCGTGTCTGGATGGAAAGGTTGCTGTGAGTTCGTCAGCTCTTGCTGACATCACCAAGCAACTGTCTGACTCGCTGACTGTTTCCAAAGAACTCACTACCGACGAATTAGAAGACACCGTACAAGTGATGGAACAGCTCAAGAGTAAAATAACGAATGATCAGATCAACAGCACAGTCGACGAAGCGCAAACACTGTTAAAGAACTACATTGGAGTTATGAGCACCGTTTTGGAACCAGACAACAAGAAGTCGTGGAAGAGTGTATCCGGTAAAATTCGACCGGCCTTGCGTCACCCAATGGAGAAGAAGGCTCGCTATGAGACTTTTAGACTACACATCAACCTCGTTGTGGCCATTGGACTTTCACAGATTTGGTTCGTCGTGGGATCATTCTTGGTGGACGTTGATCTCGTTGCCTGTCGTGTTGTGTCTATTTTCACGCATTACTTTCTAACCGCGTCGTTCTGTTGGATGCTGGCTGAAGGGATCAATGTCTACAATAAGATCGTCAAAGTCTTCAGCACCAAGAAATATGGAAAGTTTTACTTTACGCTCGGATGGGGTTTCCCACTTGTCATGGTAATCGTCACATCAGCAGCCGTATTCAACAAATATGGAGCGCAGAAAATTTGTTGGCTACACAAAGATGTCATCTGGGTGTTTGCAGTACCTGTGATGGTGGTCATAGTGGCCAACTTGTTTGTTCTCTTGTCTGTTGTTTATGTACTACTGCGCAAGACCATGGCGTTTTCTGCGATGCCAAACAAACCAAAGGAAAACCCTAAAGTCAAACGCACTGTCAAAGTCACCGTTGTTCTCCTTCCTCTGCTGGGCCTCACTTGGGTGTTCGGTTTCCTGGCTATTGATAAGAATTTTATCGTCTTTCACTACTTGTTTGCAATCATCAATTCTCTACAGATCCGCACTGCCTTGTTGGAAAAGCTCCCATCTCTTCCCCAATCGAGTAAATACCAATCCAGTGTCAAGTCTGGCGGCATCGGTGGTGAAGGAGATGCGCAGAGAGGGAGTCAGTTGGAGTCGGGTACCTATGACCAGGACACTGTTACGGCATCCGTACCAATGCCGGCTCAGGCTCAGGCTCAGGCTCAGGCTCAGGCTCAGGCTCAGGCTCAGGCTCAGGCTCAGGCTCAGGCTCAGGCTCAGGCTCAGGCTCAGGCTCAGGCTCAGGCTCAGGCTCAGGCTCAGGCTCAGGCTCAGGCTCAGGCTCAGGCTCAGGCTCAGGCTCAGGCTCTGCTTTCTCGAATTGGTTCCGAAGGAAAATGCATTCGCTTCTTTCTCTGA

Transcript

Actinostola_07930

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00002	7tm_2	7 transmembrane receptor (Secretin family)	Family	Interproscan
PF07645	EGF_CA	Calcium-binding EGF domain	Domain	Interproscan
PF12661	hEGF	Human growth factor-like EGF	Domain	Interproscan
PF12662	cEGF	Complement Clr-like EGF-like	Domain	Interproscan
PF14670	FXa_inhibition	Coagulation Factor Xa inhibitory site	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000152	PTM	EGF-type aspartate/asparagine hydroxylation site	Interproscan
IPR000742	Domain	EGF-like domain	Interproscan
IPR000832	Family	GPCR, family 2, secretin-like	Interproscan
IPR001881	Domain	EGF-like calcium-binding domain	Interproscan
IPR009030	Homologous_superfamily	Growth factor receptor cysteine-rich domain superfamily	Interproscan
IPR013032	Conserved_site	EGF-like, conserved site	Interproscan
IPR017981	Domain	GPCR, family 2-like, 7TM	Interproscan
IPR018097	Conserved_site	EGF-like calcium-binding, conserved site	Interproscan
IPR026823	Domain	Complement Clr-like EGF domain	Interproscan
IPR049883	Domain	NOTCH1 EGF-like calcium-binding domain	Interproscan
IPR050751	Family	Extracellular matrix structural protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24034	EGF-LIKE DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004888	Molecular Function	transmembrane signaling receptor activity	Interproscan
GO:0004930	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0007166	Biological Process	cell surface receptor signaling pathway	Interproscan
GO:0007186	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-