Gene detail

Detailed information of Actinostola_07327 in Actinostola sp. Cb2023 Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Actinostola_07327	ENDOCHITINASE	scaffold842_size202736	68762	105345	+

Gene Structure

More details in Jbrowse Sequence

CDS

Actinostola_07327

ATGGTGGAAAACTACTCCAAGTCATTTCATGTTGCATGGATTGTGGTGTACATTATCTATGCCGTCGCCGTGGTCGTTCTGAATCTTCTCACAGCCCTCACAATCACACTGAACAGACATCTTCGTAAGCGTTGTTTGTTCTGTATTGTCAATCTGGCCGTAGCAGACACGTTGTTCGGTATGGTTGCGATGCCTTGTTTTATAACTCAATACGGTGACTGGCACCTCAAGTGGCAGTCCGCGGCAATTTTCCAACGTCAGATAGTGTTTCTCAAGGCAGGGGAGATCTTCCCAGGCATCGCGTCTCTCTCTTTCTTGGTTGTGATCTGTCTAGAGCGATGCTACGTCACGTTTTATCCATTCCACAGTCGATCGACGCCTTTCAAGACGTATGTGGTGGGTGTGGTCATCACGTGGCTGTTTGCAGTGGTAGCTGCTGTACTGTTCATTGTTTTTAATCCGTTTTCCTTCCTAATGTTCTGGCTTATCGCTTGTACGTCCATTATAAGCCTAGGCTACACGGCCATCTACATCAAGATAAAGCGACAAAACCGTCAGCGACGACAATTAACAAGAGCAGAAGACACCGCACAACGAGAGAGAGAGCTCGCCAAGACACTCTTCATCGTCACCATTTCATCCGTCTTATGCTGGGTACCATTTGTTGTTCTTAGCATGTTGGTGTACCATGATTCTCATCGAGTTCGTCGTGCTATCCCATCCAAACCATTGCTTGTTGGTTACTGGGGACAAAACGGCGCAGGGCCGACAGTAGGTCAAGCAAACTACGAGAAACCACTGAAATGGTTCTGTGAGAATTCCAAATATGATATCATCAACGTGGCATTCCTTGTCACACTTTTTGACTCCAGGAATAAAGATGCGCTGCCAGGTCTGAACTTCGCGTTCCATTGCGGCGGTGGTGTGACTGCACAACACCCTTTCTTGTTCCGGTGTCCAGCCATCGAGAATGGAATCAAAGCTTGTCAACAAAACAAGAAGAAAGTTCTGCTGTCGGTCGGTGGCTCCACTATGTTTGCCGACTTGAAGAGTAAAAAAAACGCAATCAAACATGCGGGGCATCTGTGGCAACTGTTTCTCGGTGGGAAGGACATGGCGAATCTCAGGCCATTTGGCACTGCTATAATGGATGGTATTGACCTAAACTTGGAAGCTGGAAAACCCGATTTCTTCCCTGACGTCATAAGGGAGCTGCGCCGACTTATGGAAACTGATAGCAGCAGATCGTACCTCGTGACCTCAACCCCACAGTGCCCACATCCTGATCGCATGTTGGGACCTATCACACCAGGCACGGCTTTAGCAGGTAACTTCTGCAATGACAAGTCTGCAGGAATCCATCCACACCCATCGGACTGTACAAAGTTTGTCATGTGCGTCTACGGTCATCATTCTCCATTCATCATGTCTTGTCCACCGGAGGAGAAAGAAAGAGCGAAAGACCACAGACTTGCAGACGACATGGAGAACGAAGATTACAACAAAAATGAGCAGGCTGGCCTGATAAACACTTTCCAATCGCTTCTCGACGAGAGTGAGAAACTTGCTCGTAACCTTGAAGAGCAGAATAGCAACCTGTATCGAATAATCTCTGACGAAAAGGAGAGAGTCTCAGAGTTGAGAAACAAGTTAAGTGATCTTCAGGATCAAGTTGTAAAGGAACGCAAAAGTAACAGAGAAATGAGCTTACGGTACGAACACATGAAAGTGGAGTTTCTCTCAGCAACAACAGAAAACGAAGGATACAAACGAGACATGGCAATGATCAGAAAAGAACTCGATGCAATACGAGAAATCCAACAGCAGGTTTCAGAAGCGAAGAAACAAAAGAAAGAGGAAGATGACGAAACGTTGGAGGACTGCATTGAAGACTTGGAAGAGAAACTTCAAATCAGCGACACGATGTTACAAGCAAAGTATTTAGAAGCAGAGAAACTTCAGTCGGACTTGGAGAAAACCTCAGAGCAAGTAGAAGAATTAGAGACAAAGGTTTCTGCGATGACCGACAGCATCACGAAATTGATGGAAACGTTGGAGGTAACGGACAGAGAGGTTGGAGAATCAACAGAGCTTTTAAAAGACACACAAGCTGCATTAGAATCTGAGAAACTTGCCAAGGATGAATACATCATCAAGTGTGAGTTGTTAGAACGCAAATTAGCCATTATAGAAATGGAAGCAAAGAATGAAAGCGACGGGAGACATGACATGGAAAAAGAGATGCAAGATCTGAAGGAACACCTTAAAGCTGCTGAGGAAATGAGAAAGTACGAGGAAGACTTAAAAACTAGATCAATCGAGAACTTGAACCAAGCAAAAATGGAGAACAGAAAGTTGGAACAAATCGTCGAAGAACTTAAGATCGAGAAGGACAGTGCAATCCAAGATCTGAGAGAACAACTGGAAGAAGAGAGATTCAAAGTTGATGAGAGAATTTCCTTGGTTGAGAAGTTAGAAGAAGAACTTAAAGTCACTGAGGAAATGAGAAAGTACGAGGAAGACATCAAAACTATATCAATCGAGAACATCAACCAAGCAGAAATGGAGAAAAGAAAGTTGGAACAAATCGTCGAAGAACTCAAGAATGAGAAGGACAGTGCAATCCAAGATCTGAGAGAACAACTGGAAGAAGAGAGATTTAAAGTTGATGAGAGAATTTCCTTGGTTGAGAAGTTAGAAGAAGAACTTAAAGTCACTGAGGAAATGAGAAAGTACGAGGAAGACATAAAAACTAAATCAATCGAGAACATCAACCAAGCAGAAATGGAGAAAAGAAAGTTGGAACAAATCGTCGAAGAACTCAGGAAAGAGAAGGACAGTGCAATCCAAGATCTGAGAGAACAACTGGAAGAAGAGAGATTCACAGTTACCGAGAAAATCTCCTTGATTGAGGAGCTAGAAGAACAACTTAAAACTTCTGAGAAAATGAGAAAGTATGAGCAAAATATAAAAACTATATCAATCGAGTTCTTTAACCAAGCAGAAACTGAGAACAGAAAGTTGAAGCAAATCGTTGAGGAACTCAGGAATGAGAAGGACAGTGCAATCCAAGATCTGAGAGAACAACTGGAAGAAGGGAGACTTAAAGTTGTTGACAACATTTCCTTGGTTCAGAAGTTAGAAGAACAACTTAAAACCTCTGAGGAAATAAGAAAGTACGAGGAAGACATCAAAACTAAATCAATCGAGAGCACCAACCAAGCAGAAATTGAGAACAGAAAGTTGGAACAAATCGTCGAAGAACTCAGGAAAGAGAAGGACAGTGCAATCCAGGATCTGAGAGAACAACTGGAAGAAGAGAACAAAGGTTTCTGCAATGAGGGAAAGCATCACGAAATTGATGGAAACGTTGGAGACTGTTTTGCAAGTGGAAGAGCCTGA

Transcript

Actinostola_07327

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00001	7tm_1	7 transmembrane receptor (rhodopsin family)	Family	Interproscan
PF00704	Glyco_hydro_18	Glycosyl hydrolases family 18	Domain	Interproscan
PF01607	CBM_14	Chitin binding Peritrophin-A domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000276	Family	G protein-coupled receptor, rhodopsin-like	Interproscan
IPR001223	Domain	Glycoside hydrolase family 18, catalytic domain	Interproscan
IPR001579	Active_site	Glycosyl hydrolases family 18 (GH18) active site	Interproscan
IPR002557	Domain	Chitin binding domain	Interproscan
IPR017452	Domain	GPCR, rhodopsin-like, 7TM	Interproscan
IPR017853	Homologous_superfamily	Glycoside hydrolase superfamily	Interproscan
IPR036508	Homologous_superfamily	Chitin binding domain superfamily	Interproscan
IPR050542	Family	Glycosyl Hydrolase 18 Family Chitinases	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45708	ENDOCHITINASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004553	Molecular Function	hydrolase activity, hydrolyzing O-glycosyl compounds	Interproscan
GO:0004568	Molecular Function	chitinase activity	Interproscan
GO:0004930	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0005576	Cellular Component	extracellular region	Interproscan
GO:0005975	Biological Process	carbohydrate metabolic process	Interproscan
GO:0007186	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0008061	Molecular Function	chitin binding	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-