Detailed information of Actinostola_06484 in Actinostola sp. Cb2023 Gene info
Gene IDAnnotationScaffoldStartEndStrand
Actinostola_06484PRE-MRNA SPLICING FACTORscaffold690_size23854072784142954-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01663PhosphodiestType I phosphodiesterase / nucleotide pyrophosphataseFamilyInterproscan
PF13181TPR_8Tetratricopeptide repeatRepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR002591FamilyType I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferaseInterproscan
IPR003107RepeatHAT (Half-A-TPR) repeatInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR017850Homologous_superfamilyAlkaline-phosphatase-like, core domain superfamilyInterproscan
IPR019734RepeatTetratricopeptide repeatInterproscan
IPR045075FamilyPre-mRNA-splicing factor Syf1-likeInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR11246PRE-MRNA SPLICING FACTORInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000349Biological Processgeneration of catalytic spliceosome for first transesterification stepInterproscan
GO:0000398Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0000974Cellular ComponentPrp19 complexInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0006396Biological ProcessRNA processingInterproscan
GO:0071007Cellular ComponentU2-type catalytic step 2 spliceosomeInterproscan
GO:0071014Cellular Componentpost-mRNA release spliceosomal complexInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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