Gene detail

Detailed information of Actinostola_05741 in Actinostola sp. Cb2023 Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Actinostola_05741	ZINC FINGER PROTEIN	scaffold56_size818591	199086	219318	+

Gene Structure

More details in Jbrowse Sequence

CDS

Actinostola_05741

ATGAGTTTAGGAATCGTTCTAGGTGCTATTTTCGCCCTCGTCGTGGCTGGTTACATCGCTCAAAGCCGTCTCCCGCCACCAAAACCTAAGATCGTTGGGATAGATTTGGGAACAACTTATTCTTGTGTTGCTGTTTACCAAGCGATCACTGGACATGTGGACATCTTGATGAATGAACATGGCGATAGAGTTATACCTAGTATTGTAGCTTTTACCGAGCATGAAGTGGTCGTAGGCCACAGAGCATTAGCTCAGGCCGAAATCAACCCCATATCGACGATCTATGATGCAAAACGATTTATTGGTAAAAAATTTACCAAAGAGGAGTTGATGAAAGTTAGCGAATTTTATCAATTTAAAATAACTGAAGATCGCAAAGGAAATCCTTTATTTGTTATCGACCAAGGCAACAATCGAACTTATGTAAGTCCTGTGGAAATCGGAGGATACGTGATTGGTGAACTACGCCGAATGGCACAGAAGAACTTGAGTTCCAACGTCGATAAAGCAGTCATGTCAGTGCCAGCAGAGTTTGACATGAAGCAAAGAAATGCTACTATTCTTGCGGCCAAACTAGCTGGAATTAACGTCCTTCGAGTTATAAATGAGCCAACTGCAGCTGCATTGGCTTATGGACTTCACAAGAAAGATGGTGTCAGAAATGTCATGGTTGTTGATCTAGGGGGAGGCACTTTGGATGTGTCTCTCCTGGACATCCAGGGGGGGATGTTTGTGACGATGGCCATGGCAGAATTCAATATTAGAATGGACTATGGCTGGTTTGCATATCAATGCGACTCGGGAGAAACACTTTTCTTTTATAATAAAGTTAGTGGAGAATACAGATGGCTGTCATGCTCGTGCTCAAAAAGAGTCAGTGCCATACTTGCTCAAGATGAAAGCAATATCGGACAACCGGTGATTAAAGATACCTCTCGAGACGCTGGTGTCAGAAGCATTGGTACAGAAACTGACCCTCCCCTCCCTCCCCTCCCTACCATCACCAAGAATTTCAGGACACAGGGAACCCAAACTGACTTAAAAGACCTTGATCCTTGTGCCACAACCATTGCAAATAATGTGTGTATAGAAGAGATAGGTCCAGTTGAAGGTATGTTCTCCAGTGGTTCATTACCAAGTCATTCAGCATCACTGCCCCTGGATGAGAGGTTTCCTAAAGCCCGAGACATGTACTGTAATAGAGACACCTACAGAATAGGCACATATAGCAAAGTGAAATTGTATCCTTGCTGCTTCTGTAAGAAGGCATTCACATCCTACACCTTTCTAACCAAGCATTTAAAGTGCCATGCAATTCTGAATGATTACCAAGCCCAAAACGGATTCCAAATCAAGACAGATTCCATCAATGTCGAAGATATTAGAGGTGACAGTATCTCCTTGGCTGTTGGCCAACAGAGGATGGACACGACTTCAGAGCGGACTGCAGAACCACCAGCGGCATTAAGTACTGTCAGCCATGCCGATGTGTTCAAGCCTTTGGGTTTTGATGACACCAAGCCTCTTCAGTGTTTTCAGTGCAGTAAGAATTTTACATCAAGTGAAACCTTAGATGATCATTTTGGATTGCATTATGATGAGCTCTACTGCAAAGCATGTGAGAAGGCTTTTGGTTGTACAAAGACATTCAGACAACACCTCGCTGTCCATTTTGGTGAGAAGCACCAATGTCCACATTGCTCCAAGAAGTTTGCACTACGACTGGGACTTCTAAGGCACATTAGGTTTTTACACACATCAGTTTGGAACGACAAACTCCGAAATCACTTGCGCCAACTAGAAAAGCCGGTCACTAAGAGTAAAGAAGACACCAGCATTAGTGAGCAATCCTCTTTCAAGTGTGACGGTTGTGGGCAGTCGTTTGGGCTGTATAGTGAGCTGGTTAATCACCAAAAAGTCTGTGCGAAGTTTCAAGCTAGGAACATGAAAGACAAGCCAAAACACCCACATCCAGAGTACTACAAGAATCGTTATTGGTGTTTCAAGTGCAGCCGATCTTACAAGACGTATAAGTCGTTTCTACGTCATAAGAAGAGGTCAAAGTATCATAGGCGAAAGGAAGGAGAGTTCCGGTTAAATAAATTTGCGAAACCACAAGCAAAGAAACCCAAGGCCACCACTTCAGCTTCTCATCAAGAATGTCCCAACAGAAGTTACAGTTGTCTAAATTGCAATTTGTCTTTCAATGATTACAAGTCTCTGCTCCAACACAAGAAGCAAACATTATGCACCAAGACAACAAGGCTTGACAACAACACATATCTGTGTATAAATTGTACTGATGCTTTTCAGAGTCGGGCTGATTATGCCAGACATTTGGTGACGCATATTAGTGTGGACAAGAATGCTGCATATCCATGCAATCAGTGCAACAAGCGTTTACCTAACAAATGCACACTGGAGCGCCACCTGTACTATCATCTGCAAGTCCACAACTGTAGTCACTGCAACAGGACATTCAAGACGTTTACCGACTTTAAGCAACACAACAAGAAAGTGCACAGTGAAAGCACGTACTTCACATGTACAGTATGCAGCAAGCAGTTTTTGCAGAGTTCAGGTCTGTCAAATCATTACAAGACCCACAACGAGGCCGGGGCAGGCTCGTGCACCGGTTGTGGGAGAACCTACCACTACTTCAAAAACTTGCAAATCCACATGCGAAAATGTAAGAAATACAGGAGGAAACCCTACACAGAGAGAGTTTCTGAAGAAAAGGAGAGCGTTGAACAAGCTCCTAAAGATGGCCTTATCCAGCACATAAAGGTAGAGAAAGTTGATGATAGTTATTCAATCAACGAGGGTATTCCTATCACCACCAACCCAGGCCAGTCTTCACAGAATAATGATGGCATTTCAGACGATTCCAACGCTACACCAAGTAATTGTCCCAATTTGAGAGACCGTAAGTTTGTGGGCCGAGAGGGATATTTTGCACGGAAAGAAACTAATTTCCAGTGCACAAAGTGCCACAAGTTCTACAGTAGTAAATATGCACTTCTCAGGCATCAAGAGGTCTCGAGGCACAAACTACAACCCACTAAAGGCCCGATGAAGCGCTATAAATGTCAGATTTGCAGAAAGGCTTTTCATCTGTACAGTGTGTATTACCGTCACCAGCGACAGCACAACAATCAGAGAATCAACACCTGCAGGCAATGTGGTGCATCCTGTGCCACCGCAAAATTGCTGTCATTGCACAAGTGTATCAAATCCACTCCCAAGGCAAGTGCCTACTACATTTCACGGGCAGATCCAAGGAAGTGA

Transcript

Actinostola_05741

Protein

Gene family

Gene family	Subfamily
Transcription Factors Family	zf-C2H2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00012	HSP70	Hsp70 protein	Family	Interproscan
PF00096	zf-C2H2	Zinc finger, C2H2 type	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013087	Domain	Zinc finger C2H2-type	Interproscan
IPR013126	Family	Heat shock protein 70 family	Interproscan
IPR018181	Conserved_site	Heat shock protein 70, conserved site	Interproscan
IPR036236	Homologous_superfamily	Zinc finger C2H2 superfamily	Interproscan
IPR043129	Homologous_superfamily	ATPase, nucleotide binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24376	ZINC FINGER PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0001228	Molecular Function	DNA-binding transcription activator activity, RNA polymerase II-specific	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0140662	Molecular Function	ATP-dependent protein folding chaperone	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-