Gene detail

Detailed information of Actinostola_03591 in Actinostola sp. Cb2023 Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Actinostola_03591	RAS GTPASE-ACTIVATING PROTEIN WITH IQ MOTIF	scaffold29_size1054737	784575	800167	+

Gene Structure

More details in Jbrowse Sequence

CDS

Actinostola_03591

ATGGACAACAACGTTGATAGAGAAGACGGTCAGCGGGAGTCATTAACAGGCAGCTATGAAAGTGGAGTAGACAGTGGCCTCGAGAGGGCATCAGGGACGGAGATGGATGAACAAAGGAAGCAGAACTTGGCTTACCAATACCTGTGTCACTTGGAAGAAGCCAAAGTGTGGATGGAGGCTTGTCTGAAAGAGGACCTTCCCGAGACGACTGAACTGGAAGAGTACCTACGAAACGGAGTTCACCTTGCTAAGCTTGGCAACTTCTTTGCGCCAAAAGTTGTACCACATCGAAAGATCTTCGACAAGGAATTGAAACACTTTCAAGTTAACAAGATCAAAACCATTTTAGTTTTCGACTTTCAGATTCCATTTTGTCACCTACCAGTTGATGAGGCGGCATTGCATGCTGCTGTAATTGCCATCAATGAAGCAATTGACCACCACAATGCACCAGGAACCATGAAAGCCTTGAAGAACCCCAATGCTCACCTCGTAGACATCGACGATGACAATGGTGATGAATACCAGAGCTTATTGTATGGAGCTAAGGACACAAAAGCCAAGCAAGCTCTTGCCAAGTCCCCAGGCAGTAGCAAGGAGATAGATATCTATGACAAGTATCTCACACAAGCAGAAGTACAAGGAAACATCAGTCAAGTCAATGATTCAATAAGAAGAAAGAAGGCAGAGGAAGCATTGCAAAGATCTGTGCAGCAAATCAACAAGTTATTGGATAGTGATGATGCACCAGCCCTTCTCACAGCTCTGTCTGAGAAATCTGCAAAGTTAAGCAGTGTTGAAGATCAAAATGCCTCATGGTACTTACAGATGTTGAGGGAAAAGAGACAGGTCAAGCAAGAGAGTACTGGTGACCCAAATGCTCAGCTGTCCAAGGATGAGATTCAGGAAGCTGTCAATGCCGCAAATGAAGCAGCTGAAGCCCACAGGCAAATGATTGTAACAGTGGAAGCCATCAATAAGAGCCTTGACAAGGACAACCCAGAGGAAACCCATCAACTGATACAAAAGAATGAGGCTATGCTACCCAAGGTTTTCAAGAGAAGTGCATATTTATATCACAGTGGATTGAAGAAGGAAAAAGACAAGAAACAAGGAGACCTTGTGCATGAAGACATGGTCCAAACTGTTACAGTACTATCAGCTACTGCAGCCATCAATGCTGCTATAGACAAACAGAATCCAGACGAGCTCATGAAAACCATGCACAACTCTAATGCACAATTAGAAACTGTGGATGACTCATTGGGAGGGACGTATTTAGAGCATTTTGTATCCGTCAAACAAGAAAAGGGACAGGATTGCGGCATTGGTAAGGACGACCTGACGCCATTAGAACTGCAAATCTGTGTGGATTATGTCAACACAGTTGTACAAGAAGAACACGATCTCCCTTTTACACCCAACTCAAAGACCAACGAGCTTGAACCCGAAGAGGAGAGCAATATCCCCGAGGAGAACAACGTGAATAGTGACGAAGATTATGATACAGACTTAGACGACGAACCCCACACCGTTCACGAAGACACCAGCCAGGGAAGAGGTGCCTACTTAACGACATGCGAAAACCTACGCCTCGTTCCATGTTCGCCTTTCCTGAGACAGTTACACAAGTCAGACATGGATATTAAGCACTACAATCTAGGCCCGAAAGGAGCTGAGGCTATCGCAGTGGCGTTGATGCAAAACACCAAGGTCCTTACTCTTATTATTGCCCACAATGACATCCAAGAAGAGGGCGCTATATACATTTCTAAAATGCTGACGGAGAATTTCTTTATCACAGAATTAGATATCTCGTTCAATAATCTACGATCCCAAGGCGCTTATGCCGTGGCCGAAATGATGCGACAGAATGCCGAGCTCATGGAAATCAATCTGTCTGGAAATAAGTTTGGCGAAAAGGACGCAGAACCCATAGTGGAGGCATTGAAATCGAACTTTACCTTAAAAGCTTTGAATTTAAGTCAGAATGAGTTTTCCGAGGTAGGTGGTCAGCTTCTGGGCCCGGGTATTGATGTTAACGTTGGCTTAGAATACCTCAATCTTAGTTGGAATCACATCCGTTGTAAAGGTGCTATCGCAGTTGCCTTTGGTGTGGGCCAAAACTGCTGTCTACGAACACTGGATGTATCGTGGAACGGGTTTGGTGACGATGGAACGAAAGCCATGGGCGAGGCTCTTACCGTGAACAACACGCTCACAGAACTAGATCTCTCGAACAATCGAATTACAGTGATCGGTGCATCGCATCTCGCCAAAGGCTTGGCTCAAAACAAGACTCTCCAGACACTGCGTGTTGGTAAGAACCCCATCTCGAGTCAAGGTGCTTATGATATTCTATCTGCTGTGTACGGCAACCCTGACAGTGCCATGGAAGAGTTAGGCTTTGTAGATGTTCCAGTAAATGCGGAGTTTGAGGACTTGTTGGAAGATGTGTTGGATGCTCGTCCTAATTTGAACGTAATTTGTGGTGCAGCTATGAAAGGCAAAGACCGCGTGAAGAAACTGAAGAACAACGTTGACGTGCTCAACTTGCTGTTGGAATACATCGAGCTGCGTGGTCTTCGTATGGTAGACTTTTTCCGTCAACTTGACAAAGATGGCAGCAGGAAAATCTCTCGATCCGAGTTCATGGCTGGTGTGAAGAAAGCTGGAATACCGATGACTCGTAAGCAGCTCCAAAAACTTGTAAACATCCTTGATGTGAACAACGACGGTGAAATCGACTATGTGATTACAGCCTTGTCCATCATCAATAAGATGATCGATGAAAGAGAACCAAACGAAACAACACAAGCTCTACAGTCAGTCGAGGCTAAGCTGGGTGGCGTGGATTCTGCCAATGCTCAGTTGTACCAGGAAGTGTTGTTTGCCAGCAAGACACTGAAGGCTCAGAAAACCAACAATGAATCAGCCGAATTATGGCACGATGAGATCCAAGCATGCATCGATCATTCCAACAAACACGCTGATGAAACCATACAATTAGCGCAGGGACTGGGGTCAGAGGGGTATTACCTGAATGTACAGAAGTGTATTTGA

Transcript

Actinostola_03591

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00307	CH	Calponin homology (CH) domain	Domain	Interproscan
PF13499	EF-hand_7	EF-hand domain pair	Domain	Interproscan
PF13516	LRR_6	Leucine Rich repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001611	Repeat	Leucine-rich repeat	Interproscan
IPR001715	Domain	Calponin homology domain	Interproscan
IPR002048	Domain	EF-hand domain	Interproscan
IPR011992	Homologous_superfamily	EF-hand domain pair	Interproscan
IPR018247	Binding_site	EF-Hand 1, calcium-binding site	Interproscan
IPR032675	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR036872	Homologous_superfamily	CH domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14149	RAS GTPASE-ACTIVATING PROTEIN WITH IQ MOTIF	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005096	Molecular Function	GTPase activator activity	Interproscan
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005516	Molecular Function	calmodulin binding	Interproscan
GO:0005938	Cellular Component	cell cortex	Interproscan
GO:0051015	Molecular Function	actin filament binding	Interproscan
GO:1903479	Biological Process	mitotic actomyosin contractile ring assembly actin filament organization	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-