Gene detail

Detailed information of Actinostola_03561 in Actinostola sp. Cb2023 Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Actinostola_03561	DNA REPLICATION-RELATED ELEMENT FACTOR, ISOFORM A	scaffold297_size416616	313961	319361	+

Gene Structure

More details in Jbrowse Sequence

CDS

Actinostola_03561

ATGACTTCATCGGAGGCTGAAATTTGCGAATTTGAAATTGTCGTCTACATCATCGGCTCTCTGTCGAACATCATCTTGCTGTATGTGTGCTGTAGGAAGGACACCTGGCGAGAGTTCGGCAACACCAAATACCTCATTGTTTCTCAAGCCGTGTTTTCGTTGCTTACAATTTTAAGTTACTTCGGTCTGGTTGTGGAGTATGTTCCTCGGCGCTACTGCAATGTACTTTCTAAAGCAACAGCGATGGGTCTCTCTCTTGCTTTATTCAACTTCACGTTTCTGGCCATCGTTAAACATGCCCAGGTGACCCGCAAATGGCAACTTCGTTCCAGCTCTGTTATGCTGATAATCGTGTCCGTATTCGTCTTCTCTGCGGCGCTGTTCGTATACACATCAGTGGTAGGATTGTGTATCATCATCAACGGGTGTCCTGATGTCATCATAGATGGATGTACTACCAGTGAGCCATGGAGTACAATGAATGTATCGTATGCTTCTGTCTACATTACACTTCAGTTCATCAATCCTGGTATTATTATCATTAATCGGCTGGTTTTGGTTGGACTTCACTTATGGAGAAGTCAAAGCGTCCAGTCTAAACCATCCACACCTTCCATCGTACTAGAACTATTGACCAACACAATATCTGTTCTTGTTGTTGTTCTACTGTCAGCGGTATCACATGGCACGTTTTTCAAGATGGCGGACTTGAGTGATTCAATTTCCAACTCAGATGAGTCTGCAGATGAGGGTCCAAGTAATCCAATCGCGGAAGCTAAAAGGCTGGGGGCAAATCTCTCTACTCCAAAGAAAGCTAAAATAGCTAGAGAAAGAAAAATTCAAATCAATCCAGCCGGTAAAAGTCGCTCTGAGCGTTGGGAAAATGACCCAAAGTTGAGTTCGTGGCAACGTGTTCAAGAACATAAGGATGAATACCTCACAGCAGTTAGCGGAAAGCTAAGATGTGAGGCTTGCAAGGAGACTATCAGTAAGAAATCTAGTACTGTCAAGAAACACATCCAATCCGCCAAGCATGTCAAGGCAAAGAAGGCTGTCCGTTGGACAGCAAAAAAAGACCAGTCAGTACTAGATTTGATCAGAAGGAATGATCAAGCAAAGCATCCCAAAGGTGAAACACTGCCTCTTGATATGCGTCTGTATCGCTTTGAATTGATCGAATGCTTTTTAGCAGCTGGAATTCCTTTATCTAAAATTGACTGTCTACGCTCGTTTCTTGAAAAGTATGGGCATAGGCTTACGTCGGACAGTCACTTAAGAGAGTTAGTGCCTTCCGTTCTTGCAAAAGAAAAAGAGACGCTGAAATCAGAACTATCTCAAGTGAAGGCCGTTTCGACCATCTTTGACGGCAGCACTCGTTTAGGTGAAGCTTTAGCTATCGTCGTGCGCTTTGTAGACAGTCATTGGAATGTCCAACAAAGGCTTGTCAGACTTCAAGTATTAGCAAAAAGCTTAAAGGCTAACGAGCTTGCCCAATGCTTTATACAAGCCCTGGCCGTTGATTTCTCGATCCAGCCCGGAGCTCTATTAGCGGCAATGAAGGACGGTGCGTCTGTGAACAAGGCAACACTGCAGCAAGTCAAGTTCTTTTTCCCACAGCTGCTGGATGTTACTTGCTTCTCACATACAATCGATAATGTGGGCAAGCACTTCGAGTTCCGTGTTCTGGACACATTCGCTCAATACTGGGTGAGCATGTTCTCGCACAGTGCAGCCGTGCGCCTTGCCTGGAAGACCAAGACTGGCACTGCTATGCGTAGCTATAGCCCGACACGATGGTGGAGCAAATGGGAGACGATGAAACAGGTACTGGATTATTTTGGTGACGTGGAGCCATTCCTCAGGGAGAATGATCAGCTTGTTCCTGCAACTAGAGTTCACTTATTGGAGATTTTCAACTCTCCTGCTGACTCTAAAGATCTTGAACTTGAACTAGCTGCTTTTGTTGACGGAGGAAATCACTTTGTCTCAGCTACGTACTATTTGGAAGGGGATGGGCCCCTTGTTTTCAGTTGCTACGAGCGGTTAGCCACAGTGTCCCATTCAGTAGCCTTGGCCAACTACCCTAATGTTGAAGGAGTTGCTCGCCGCCAGGCAAATGGAAACGTGCCTGTTTTCAACCAGTTAGTAGCCAGGGCCAAAGCCTGTATCAATCCTGGTTTGCAGTTCTATCAGCGAAAGTTCAGTCAAGAATTTTATGATATTGTCCGTGCCTTTCGTAGTGCCAGATTGTGTTGTCCAGTACAGGTTCAGCAGCTTCACCCTACAGTTGCTTCTGTGGAAGAGTTAAGGAAGTTTTCCTTCCTTGATGATGACGGTATAATACAAGGGCTCACCGCCGAACTCCCCCGGTACATGGCCATTGCAGATGGCACAGCTTTAGAGACCGAGGAAGAGAAGCTACTTTGGTGGTCAAGAAACGAAGCAACCTTGCCCAACTGGTCCTCAGCAGTAAAGAAAGTACTTCTAGTGCAACCGAGCTCTGCCTCTGCTGAAAGAGTGTTCAGCTTAATGAAGAATTTCTTTGGGAACCAACAAGATGCCGCCCTAGAGGAGACAGTTGAAGCTTCGGTGATGCTCCGCTACAACCAAAACCAGAGGAGGAAGGTCGTCGTACTTTGA

Transcript

Actinostola_03561

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05699	Dimer_Tnp_hAT	hAT family C-terminal dimerisation region	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001510	Domain	Zinc finger, PARP-type	Interproscan
IPR008906	Domain	HAT, C-terminal dimerisation domain	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR052717	Family	Vacuolar processing and transposase activity regulators	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46169	DNA REPLICATION-RELATED ELEMENT FACTOR, ISOFORM A	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0046983	Molecular Function	protein dimerization activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-