Detailed information of Actinostola_02574 in Actinostola sp. Cb2023 Gene info
Gene IDAnnotationScaffoldStartEndStrand
Actinostola_02574LYSINE-SPECIFIC DEMETHYLASEscaffold212_size488218272688340300-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02373JmjCJmjC domain, hydroxylaseDomainInterproscan
PF02928zf-C5HC2C5HC2 zinc fingerDomainInterproscan
PF08429PLU-1PLU-1-like proteinFamilyInterproscan
PF21323KDM5_C-helLysine-specific demethylase 5, C-terminal helical domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR003347DomainJmjC domainInterproscan
IPR004198DomainZinc finger, C5HC2-typeInterproscan
IPR013637DomainLysine-specific demethylase-like domainInterproscan
IPR048615DomainLysine-specific demethylase 5, C-terminal helical domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR10694LYSINE-SPECIFIC DEMETHYLASEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000785Cellular ComponentchromatinInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0010468Biological Processregulation of gene expressionInterproscan
GO:0032452Molecular Functionhistone demethylase activityInterproscan
GO:0034647Molecular Functionhistone H3K4me/H3K4me2/H3K4me3 demethylase activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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