Gene detail

Detailed information of Actinostola_02349 in Actinostola sp. Cb2023 Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Actinostola_02349	ATAXIA TELANGIECTASIA MUTATED ATM -RELATED	scaffold1_size3179133	1594184	1618163	-

Gene Structure

More details in Jbrowse Sequence

CDS

Actinostola_02349

ATGTGTCTAATCACGTCCGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTATCCGTCCGTCTTCTGGTGACAGCCAACGCTTGCGACCTTCTTTGTCCGTCGGAACATCTGAGACCCAGTCCTCTCTCTTGTTCGCGAATAAATCACGTGATACTTACAGGAAGTACAAACCTGTACCACGTGACTTTGGCACTAGACGGCTGGGTGCCTCACAAGCAAGTACACAACCTGAAATGACACAAGATATAAGCGAGCAGCAAGAGATCCTTCGACTAAAAAGACGTTTCCTGAAAGACGACACCACGAACAGAAGCTTCTTTGCCAAACGTGAGGCTATGAGGAAGAAAGTGCGAGAGGAAATTAGGAGCCGGCAACAAGCATCACGTGACAGTCACGTGGTCATGTACCGGAAGTACCGTGCAGGGGAACTTCCTGACATACAAATAAAGCATTCTGAACTCATCGCCCCTTTGCAGGCCGTTGCCCAGTGTGACAGCACCATTGCCAAGCTTCTTTTCACTGCTCTTTTCCAAGCCATCTTTGTCGAAGCAGAGCGAGGGGAGGACACTGTCTCTGATATCCAGTCCGCACTAAACAACATGGCAACTACATCTACTCAGTATTTCCCGCCATTTGTGTCTAGTATCCAGGGAATTTGCTTCAATGTCTCTCAGCTGACCATCGAACCTTCTTTAGTATGCACTGCTTCTCTCACAAGTTTACAACAACCTATCGGCATCATGCTCCTAGAGAAACAACTGCTCAAGAACATGGAGAGCGAACCCAAGAAAAAGAAAAGAGTACGTACAGGCAATACACCGGAGTCTGGGACAACTGCGACTTGGCTGGAACTGGCAAAGTTGTACAGATCTATTGGTGAGTACGATGTTCTTCAGGGTATTTTTAGTGATCATATCGGTACACAAGGGATCACTAGAACAGCCTTGGAGGCAGAAGCACGTGGAGACTACGCCCAGTCACTCAAGCTATACAACGAGGCGATTGCTTGTGAGAACTGGGCGAATGGTGAACCACAACAAGAAGAAGAAGATTTGTGGGATGACGCTAGACTTGAGTGCTTCAACCGTCTTACTCAATGGGAAAACCTTGACAAGTTTTCCGTGATCAACATCGACGATGATGAGCCCGCAGACTTGGACAAAGTTTGGTCAGACACATTCTATCAAGAACATTATCTACCGTTTATCATTCGAAATAATTTCAGTACAACAATCCCACTCAAAGGCTTGTTTGACAAGTGGCTGTCAAGGTTTCCTGATCCAAAATTTCATCCAATCAGCGTCTGGGATGACGTCACAACCAACAGGTCAGAGTCGATGGATTCGGAGGAACAACGTTATGGCGTGGGTCTAACATATGTTCAAAATCAGATTCAACGGCAGAAGGTCTTGCTACAGTTAAAGATTGCTGACACGGCGAAAGAACAGGCAAACTTCCCAGTAGCCATCAAGCATCTGCGTGAGGCTTTCAAAGTTATTGTAGAGGATCTCAAAGACGATGGTCTTCAGCTCCAATGGACTCATGTCTACGCCTGTGTACAGCATAAGAAATCGCACGTACTTACCGCCGCTGAATCCATAGAAACAGCGCTTAAAACCATCAGTGAACTTGAAAAGTTTTCTGATAGCCAAGAACTGAGGAAGACTCCTACAATGGCTCTACGTCACCACATACTTAAAGGTCGTACGTACGACATCATGACCAGTGCTGTTGATACTGAAGGTGATGCGGTCATTCTATCGCTGGATGACAACCAACGACAACGTCTATCGTCAATCTGCGTGAATACTGACTCCTGTGAACAGATTGTCAGTCAGTTGATGATTCGTTCCTTTACATCCTTGCAAAACGCCATTAAATCAGCTAAGACTATCGAGGAAAAAGAAAAGAACGGAGAATCCAGTTGTTCCATGGTAGAAGCCATGATGGCGATGGTCAAGTTTTGTGATTCAGCATTACGTAGAAGCGAAGATGAAAATCCTCTTCTTGATCAATTCATCGCTGCCCTAGAGCATCTACAAAACCCAGTACTGGCGCTCAAGGACTGGTTTGAGGAAATGAAATTACATCCGGGAGACAAAGATAAACGTGGAGTAGAGGAGTGTTATCATGACATGTACAAAAGATTATTGGATTACAAAGGACAGACGGGGAGAGGGGCGAAGACCATTACCCATGAGCTGGGACCATATAGGCGGAAGTTTGCGGAGGTATTTGTTAGCATATATTATCACCTCTACTAA

Transcript

Actinostola_02349

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF19704	DNAPKcs_CC5	DNA-PKcs, CC5	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR045581	Domain	DNA-dependent protein kinase catalytic subunit, CC5	Interproscan
IPR050517	Family	DNA Damage Response and Repair Kinase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11139	ATAXIA TELANGIECTASIA MUTATED ATM -RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000723	Biological Process	telomere maintenance	Interproscan
GO:0004674	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006302	Biological Process	double-strand break repair	Interproscan
GO:0006303	Biological Process	double-strand break repair via nonhomologous end joining	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0008630	Biological Process	intrinsic apoptotic signaling pathway in response to DNA damage	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-