Gene detail

Detailed information of Actinostola_02191 in Actinostola sp. Cb2023 Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Actinostola_02191	DENDRITIC CELL-SPECIFIC TRANSMEMBRANE PROTEIN	scaffold1922_size87474	17156	45480	+

Gene Structure

More details in Jbrowse Sequence

CDS

Actinostola_02191

ATGGAAAGTATCTACCTCAAGGTCACGCGGGACTACACACCGACTGACAAGGAGAAGCGTTTTGGTGGACAAGATTCGGCCATTACGGTAGAGAAAGGTGACATTATCTTTGACGTTCATAAAGACGACGATGGATGGATGTGCGGCAAGAATTTAAACACAGGAAAGTCTGGACGTTTTCCATCAGATTGTGTCGCGAAATTATCCGACGAGAAGGACAATTCGTCACCTAAAACAGCTGAGAGGAAAGACTCTTCAAGTGCAACTCCACCAAACCGCCCTCGTGCGAGTGTAGACACGAAATCAACGGAGCCAAAGCGAACAGTCGAACCTACTGGAGACCTACGAAGGCCTCCCAATCCGCGACCATTTGGTCTCTCGTCAAGGTTCCCAAAGTCGTACGAACGAGAAAAGAAAGAAAGTTCTGGTGATTCTGGTGTCGTTGAAGACGGGGAAGATTATTATTTGAATGACGAACCACCGGAGAAGAAAAAACCTCCTGACAATCGTAAAACGCCGAGTGAAAGTGAAACCAAGAAACCGTCAATTTACGAGTCGAAGTTTGGGAACAAAACATACTCTCCGATCTACAGTACACGACCAAGTGTGTCGAAACTGAAATCAGCTTTCCTCGACAACGATCTAAAAGCCACGAAAACACCAGACATGAAGGGAAAAGACACACCCAAAGACAACATCGAGATGGCCAAGAAACCGACTGTCAACTCAGAAGCGAAAGATAAAAACACGAAGATACCAAAGGTGGCTTTGGCTGCCAAGGAAGACGATAATGACAGTATGTATGCGAGCGCTGAGATCGACGACAAACCGTCTGATGTCAACAAGAACAAGAAATCTGATACTTCGAAGCAAGTAAAAGATAAAAAGGTAAACATTCAAGATAATCCGTTATCTAAAGAAGGAGGGCCGCCATATCACAGCTACCAAGTGCCTCAAGCACCCGACAAGCCCCCAAGAACTGGTGGATGTTCCGAGTGCGACGAGCCCCATATTTACGCCGATCCGGCGGCCGATCATTACATGGAGCCGAACACAGCACCGGAAACATCTTCGGCTAAGTACGACTTAGATCCGACAGACAATCCGCAGGAAAAGCTATTGGAAAAAACAACAGACAATAAACCGGAGTCGGCGAATCGGCGCTCGTACAATCGCATGGCATCATACGAGAGTATCAGCAATGTTGGACCCAAGAACGCCAGCAAAGCGCGCTCAACCGAAAGTATCCGCAAAGACGCCATGAAAGCAGTCAAGAAAACTAAAAAGAAACTGACTTCACCGGATAAATACCCCAAGATAAGAATAATCACTGGAACACTTCTTGGTATTTTCTTCGGAGTGTTTGTATTTTTGTTGTTTTTCTTGGTGATTCCTGCCCTACATGTCGTTTCAGCGATTGTAGCTGGCATCGTCGTTGGACTTGTATTCGCCATGATATTTGGTTTTCTAGACCGCAAGAGACTGCTCTGTATAATTTTGCTGATATTTCCCAGTTTCTTTGCGACACGTGGAAAAATAACTCTCTGGGTTTTAATTCTGTACTTTCTGGTCGCTGGCCCGCTCTGTAACTTTATCGGTAATGTACATATAATAGCATTATCACGCGGGGATTGTTTCGTGACTAGTGGAAGTATTGTGGCGGGCAACACTAGCGATGAAGCGTATCCTTCGTATAAACGTGTGGTTCACCCATTACTTCAGCGATATATTGACACGATGGGAGAACTGAAAGAGTTAGTTAACACTACTATAACACCACAGTTCAATAAGACCACGCTACAGGTACTGTGTGCCGACCTTTCAGTCGGATTGAAAAACAACTGTCTTTCTCTAGCTAACAAGGAGTATCAAGAGTGTATGCACGATTCCAAAGATCCTAAGATACTAAAGAGATGCCAGACCCTCCTACCCCAAATGGTATGCAACTCACTGCAAAACATTGAGGACACTTGTCAAAATATTGACTTAACGCTGACTGGGAAATTTGTGACTGTGATAAGCGATGCCCTGAAAAAGGCACCAAGTCACGCAGCAGTCGCTGCTTACAGACACGAGGATGGACCGATTTTAGTGTCACCAGCACGACAGAAATGCGATAACTGTGCCTCTATTCTGACAATGTTACTACCCTTGCTGATACTACTGGTGTTATACGAGGCTTACAGCTATCACAAACTGTACCTCGCTAGAAATGACTTCGATAACCAATATCTGACTACCCACTTTAAGACAATCGAAGACACTCGCAAAGCTAGCGGTGCAAACGATGGGCTGTTGCCTCTGAAGAAATGCGAGCATCAGAGGTACATTCAACCTACGTCACCGCAATTCACCATCTCCGAGAGAAACAATATGCTAAAGTATCTACTGGTTTATGTAATCTTCTTGGCTTTTGTGCTCTTCTTCATTTTGTGTGACTATTATCTGTACTACACGTTGACCAGAGAGTCAGACACACAAGAGTTTAGCCCCAAGCAAAGCAATAATGCTACGAATACAACTACTACTAGTAATGCTACAGTATCTGCTGCTGTTGCTGGAATAGCGTGCGCGCCTCTAGTTCTACCTCTGGAGCAGTATTATGTAGTGGTGATATCGGTTCTCCTTGGATTACTACTACTTATGATTCTGTTCCAGCCGTACGTACTACGACTCAGGCACTACATCGCTTCTCGTCTCTACCGCAGAAGGGAGCGTAAGCGCATCGCCTACGTGTACTACAAGCTCCTCGAGGAGCGCAAAGCCTTCTACAAAGCTGTCATCGATAATATCAACACGGAAAGTGAAGCAAACTACGCCATGGATCAACTCGATGCAGTCAGAGTTCTTGCCTGGAATTTCCAGACGATGGAAAAAGTGTTTTCTGTGCTGGGAGTGAGCCTGCGGAGTTGTATGGTGTGCGGTCGTGGGTTGAATCGTCACAATCCAGTGACGCGTTCTTCGAGCTTCATCCAAGGAAGCTCTAGGAAGAGAAAGATGGACAACTCACAGAGCGGAATCATTCTTGCATATGATATTACTAGATTAGAAACCTTTCATAATATTAAAAAATGGCTTCGATATGTAGACGAGCATGCCAACAATAATGTCCAGAAAGTCTTGGTAGGAAATAAAAGTGATATTGACAGTGAACGAATTGTACCAAAGGAATCTGGTATTAAGAATGGAGTTTCTCACAGATCAAATACAGATGACATTCGATCAAGTGCCATCTTCCTTGACACCAAGAAAGAGGTTCTTCACGAAAACAACTGTTGTAATATGACATGA

Transcript

Actinostola_02191

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00071	Ras	Ras family	Domain	Interproscan
PF07653	SH3_2	Variant SH3 domain	Domain	Interproscan
PF07782	DC_STAMP	DC-STAMP-like protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001452	Domain	SH3 domain	Interproscan
IPR001806	Family	Small GTPase	Interproscan
IPR012858	Domain	Dendritic cell-specific transmembrane protein-like	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR036028	Homologous_superfamily	SH3-like domain superfamily	Interproscan
IPR051856	Family	Cell Surface Receptor and E3 Ligase Protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21041	DENDRITIC CELL-SPECIFIC TRANSMEMBRANE PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003924	Molecular Function	GTPase activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005525	Molecular Function	GTP binding	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-