Gene detail

Detailed information of Actinostola_02159 in Actinostola sp. Cb2023 Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Actinostola_02159	RAN BINDING PROTEIN	scaffold190_size501082	98962	135488	-

Gene Structure

More details in Jbrowse Sequence

CDS

Actinostola_02159

ATGGGGTGGACTCAAGATGAAGTCGACAAATACGTCGCCAAAGTTGAGAGAAACACGAATGACCCAACTGAGAAAAATCTGAAGGGTTTTGCTTTCGCTCGGCTGTACAGAGAAGCAAAAGACAACAACAAAGCCAAAAGACATTTGGAAGCTTACTTGAGCGTCAATGAAGCAGATTTCAGGTCTTTAGACTTAAACAACACCCAGCATGATTTAGTTCTCAAAGTTGTGGAACTCTATTGCCAAGTCCCTGTTGATCCCGACAGAGCCAGGGCTTGGGCAGACAGAGCAGCAAGACTCTACCCAGGCCACACAGCAGTGTTCAAACTACGGATGCATCTTTTGGAGTCGGCAGGGAAGATTGATTACGACCAGATGGAAGACTTAATCTCTGAGGAAATGGCCAAGAGACCAAGAGATGCAGAGCTGCACATCAGACTTGTCAAAGTGTATGCTTCGACAGGTCGTCTGATTGATGCTTTCACCCACTGTGTGTCTGTTATCAAAACGAAAGCTTTTACCAATAGCCAAGAATGGTGGAGATGTGCCATCGATGTATTTGAGAACTATTTGACTTGGCCAAGGGCACTGAAGCTTGCCAGTGTTTGCTACTTGACGTCCATCCAAGTAATTGAGCCTGAAATCAATACTCCTTGGGTTGCAACAGCTCCTAAAGCCAAGGATGCATTGAGATGGTACCGCATGTCTTGCCACAGACTCAGCCATTCAGGCCATCTGTTGGGTGAGGTTGCCAACAAGTATGGTGAAGAGTGGTTGGATGCATGCATTTCTGATTGGTGTACACAGCAGTCATTCTTGGCAAATGATGAAGATTACTGTCTCCTTGAATTGCACATTCCATCACCAGAACAGATGATCAAGTATGATGAAGTTTGCGTCAGTGATAACCCAAGAAACCTGCAACTCCTTGTCTGGATAGGATTGCACTGGCACCAGTTTGAAGGAAAAATGAGGCCTGGAGTTGGTGTTATTGTTAGCCGAATCTTCGATGGCCTCAGAATGGATGCGCACAACATTGAGCAGACCGCTGCAGACACAATGAGCTTGAGAGATCTGGAGAGTCTGCAAGCAAGAAGTCTCCACTACTGGAAGGAAGTTCTTGTTTTACTTGAAAAATTTGAGAGAAATGAAAGTATTCCTGTCAGAAAGGATCCGCTTTTCGACCCTCTTCAGGATAGTTTACAGAAAGTGGACATCAAGTTTAACATTCAGAAAGCTCGTCTAATCCTTGGTGAAGCTGCCATCAAAGAGGGAAGGATAGAGGAAGCAATGGAAATGTTTGAACAAGTCAAGACAACCCAAGGAATGTGGAACCTAGCACAGATATATAAGTACTTATCTAATGTGGAAGCCCAAGCTGCTGCATCAGAGGATCTTGGTGTAGAAGCCCATTCAAGTGCTCCTGCACAAGAATACTATAACTGCTTGAATAAAGCCAAAGACCTTTTGCTTGTTTGCATGGAAAGAGTTGGTACTGAGGAGAGACGACGACAAATCCTACAGGATGAGCTAAATGACTTAGAAGACAGGCTAAACGAAGATCCAAATAAAGCTCAAAAAGCCACAAGAAAGCAACTTGATTTTAGACAGTTGGATTTCCAAGCAAGCAGAAGCTCAACCACCATGTCAGATGCTCAGGAATCTGAGGACAACTTCTGGCTTGACCAGCCTCAAGACGGAGGTTCAAAAGACTTGATTGCAAAATTGAGTGAAGTGACTTTGAACAATGGATACTTACAGGAACAAATGGCCATACGAGACCAATTTGTCCTTGATCTGACCAATAAAGTTCAGAATCTTGAGTGTGAAATTCGAGAACTAAAGCTTCATCAATTTTCCGGTGTATTGAGCCCTGCAAACTTCACAAGCAATTCCTCGTTAACGAGTGTGACCACCCGTGCCACTCCAACTACTATGGCTAGTCCAATAACTCAGGGCACGCCTGTCATGACTGCTCCATCGAGCACATCTATCACTCCAACTGGTTCCCATCAACGGACCCAACAGAATGGTTATCCAACTGAATCAACACCCGTTGCTAAACCATCAGTCAAATCTCGTCTTGGTCCACGAATTCCTGCAGCTGCTGAACCAGAATTACCTGTAATTGATGCAAACTTTTTTGCTGGTTTAAGTCAGTCAAACAGCCCAGACAGAAGAATAGAACAAAAAGAGAATGAGGAGGAAGAGGAGGAAGAACAAGAAGAACAAGGCAGCCCACGACATGGTTCATATGATGATGGCATACATTTTGAACCAATCATTCCATTGCCCAAAAAAGTTGAAAAGAAAACTGGAGAAGAAGGAAAAAAAGTGTTGTTCAGCAAACGTGCGAAGCTATATCGTGATGACGAAGATGACGACAAGGAAAAGGGTTCAACAGCAGGAGTTTCTGGTAGCCAAACCACACCAAAGTCGTCCACAAAAGAACAGCCAGGAGTATTTTCTGCGGCTTCTCAAGAACCAACAGTTGCCCCAGCAGCTACTGCTACCACAATCATGCCTCAGATGTTTTGGCAGCAGCAACTAGAAGAAAAGTTCAAATTTGGTAACCTCCACAAAACTCAGCCTCTAGCTGGAATGGCACCTGCATTTTCACCTGTCAGTGGTAAAGCCGATGTCTTGTATCCAGCGTCATTTATTTTAAGTCATATGGCAGGAGGTTCACCAACTGGCTCCCAAGCTAAGCCATCCACTGGAACAGCTTCCAGTACTTCTCAAGTATCGCAGCGTCCTGAGATGTTGATTTCCCTTCTGCAAGGAAAACCCAAAGAAAGCTTTCCAGCATCGGACTCCGAATCCTTAAAGGGCGCTTCATCTCTACCTACTTCGTTTGCTTCTTCAACTACGGCATCTAAAGGGGTTCATCCGTTCAAAACAACCCAAGAGATTTATGATGATTACTCAGATGACGACGATGAAACTGAAACAGAGGACTCTGAAAGTTACGATTCTAGTGAAGGAGACTTTGAAGAGGGTTCATTCGCAACAGCCGCGCATCGACCAACCCCATTGTTGCAGAAAGTGTTAACACAGAAAGCAAACAGTAGTTATAATGATTCTGCAGCAAAAGCTTCAGAACGTGGAGGTCCGGCAACAGAAACTGAAGATGATGGCATTCATTTTGAACCAGTTATTCCGCTTCCAAAACTAGTCTCTAAAACAACTGGCGAAGAAAATGAGGACACCCTGTTTTGCCAAAGAGCCAAAGTATTCCGCTACGATCCTGAAGGAAACCAGTGGAAAGAGCGTGGTGTTGGTGAAGCCAAAATATTAAAAAATACGAAATCTGGAAAAAGTCGTATTTTGATGCGTCGCGATAATGTTTTGAAAATTTGTGTGAATCATCAAATCACCTCTGAAATGGATCTTCAACCTAAAACCGAGAAGTCTTGGGTGTGGAACACATTGGCAGACTTTGCTGATCAAGTCCCCAAAGCTGAAACACTGGCTATTCGTTTTAAGACCACTGAGATCGCTATCGAATTTAAAGGGGCCTTTGAGAAGGTGAAAGATGAGATTGCAGGTGGAACGTCTGGAGAAAAACCGACCGAGATCCTTGGACAAGACAAAGTAGATGCATCGCACGAAGGTGAACCAACTCAGCAGAAGAGTAATGATGAGGATAAAGGTGATGACCAATATAAAGGATCATCAGCAGATCAAAAGACTTCAAGTACTCCTAAAGAGGAACAAAGTCCTGGCCCCGGTTGCACGAAAGACCAAAACCTAAACATGTACAGATCTCGTACATCCCAGCAAAAGTCAGCACCAGAAGAAATCGATCCGACCATTACCACAGTTGTTGAACCTAGCAACGAGGAAAAAGATCGTGCTAAAGGTCTTCTACTTCCAGAAGGATTCTTTCTGTACCAAAGAAAACCTAATGCTGATTTGGAAGCTTCTCGGAAGACAAAGAAAGAACAGCCAAATGTGCCAGAAACTAAGCCAGTAGAGCACAGCCAAGAGGACGAAAAACAGTCTCCGAAATCTGGTGTATTTGGGTCTTCGTCATCACAACCTTTTGCTTCCTTTTCTGATGTATGCGGTGGCCAGAGTTTTCAGTTTGGAGAGGAGTTCAAGAAAGCCTTTGAAGACTGCCAGCAGAAGATGCGGGAGAAGACAGAAGATAACGACTCTGCATCGGAACAAGAACGAAAGTGTCTATCATGTGGAGAACCTAAGCAAGTAGAGGAGCCGGTCAACGTGAAAACTCTAGGTGACAAAGAGTCACTGGATGAGAAATCTTGTGATGATGTCCAACACGACTCAGGGGCAGATTCAAGTGTTGCAAAAGAAACTAATCCTGCAGAAGAATCCAAGACAGGATTCTTGTTTGGAACTCAATCTATTTCTTCACTGTCGTTTAGTGATGCTGCAAAATCAAATCTCTTTGGCGAAGTGTCCTCCTCAGAACCATTTTCTTTTAAGGGTTTGAATGATCCCCAACCAGATCATGGTAGCAAAGAAGATGATGACCACGAAGAGGGATACCACAACGTTTCGGGTGATCACATCCATTTTGACCCAATAATTCCACTACCAGAGAAGGTACAGGTGGTCACTGGAGAAGAAAAGGAAGAAATTTTGTTTAAAGAACGTGGAAAGCTCTATCGATTTGACACAGATGCAAAGCAATGGAAAGAGCGGGGTGTTGGGGAACTGAAGATCCTTTCAATGAAGTGA

Transcript

Actinostola_02159

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00638	Ran_BP1	RanBP1 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000156	Domain	Ran binding domain	Interproscan
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR011993	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR045255	Family	Ran binding protein RanBP1-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23138	RAN BINDING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005096	Molecular Function	GTPase activator activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005643	Cellular Component	nuclear pore	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0046907	Biological Process	intracellular transport	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-