Gene detail

Detailed information of Actinostola_01575 in Actinostola sp. Cb2023 Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Actinostola_01575	GLUTAMATE CYSTEINE LIGASE	scaffold1581_size107336	6018	26808	-

Gene Structure

More details in Jbrowse Sequence

CDS

Actinostola_01575

ATGCTCGCAGTTGTACATGGTCTTGAGAAATTTCATTACTATGCATATGGCCGCCCTGTGGTCGTTGAAACCGATCATAAGCCATTGGAAGCCATTTTCAAAAAGCATCTGGCAAGCTCTCCACCTCGCATTGCAAGAATGATGTTACGAATTCAAAAGTACGACGTAGACATCAAGTATGTTCCTGGGAAGGACATACCCCTAGCTGACGCACTGTCCCGACTCAATCCTTGTCATGGCGACGAAATCTCAGGTCTTGATGTAACACTACACGAGCTACACATGCACCTCAATGCAAGCCCAACAAGAGTGAAGCAGATCCAAGAAGAGACAGCAAAAGATACAACACTCCACTCACTTCGCTCAGTCATCACTGAAGGCTGGCCCGACAAGAGAGTAGAGTGCCCCCCGCACTTACACCCCTACTGGAACTATCGTGACGAGCTCACTGTCACTGACGGGCTAATTCTGAAAGGTACTCGCATCGTCATCCCAAAGGCCTTGCAGCCAGAAGTACTTAAGCAACTTCATTATGCCCATCAAGGTACTGAAAAGTGTAAGCTCAGAGCCAAGGGATCAGTGTTCTGGGCAAATATCAACGCTGATATTGAAGGCATGGTAAAGAGTTGTCCACCATGTCAGCACAACCAGACAATGAACACCAAGGAACCTCTCATGCCTCATGATATTCCACAAAAACCATGGCACATCTTAGGATCAGACTTGTTCTTTTGGAACAATTCCTCATATCTGCTAGTCTGTGATTACTTCAGCAAGTTTCCTATTGTGCGCAAGCTGGTTAACATCCAGTCCAATACTGTCATTGCACACCTGAAAGCTATATTTGAGGAGCATGGAATCCCAAGTAAGTTTGTCACAGGCCATGACACACAGTTTACTTCAGCTACATTCCATGATTTCAGTCAGACATATGGTTTTGTTCATGTCACCACAAGCCCTTACTACAAACAGGCAAATGGTTTCATAGAGAGGAATATCGGAATCATCAAAAATGTTCTGCAAAAGTGCAAGGAATCTGGAGCAGACCCACATCTAGCAATGTTGTGTCTGAGAACCACTCCATTGGATCACAACCTCCCATCACCAGCAGAACTGTTGAACTCAAGAGTCTACCAGTCAAACCTCCCAGCTGTGTCCAAGCCTGCTTTGTTCAACACCCAAAATCATGATGCTAACATCAAACTACAAACAAGACAGGACCGTCAGAAGGAGTACTATGACAAGACCTCTAAGGCCTTGTCCCCTGTTTATCCACATGACTCTGTCCGTGTTTTCAACCCTCGCAACCTCAAGTGGGAATCTGGAATCGTCCAAGCTTCAACACAGACGCCCCGCTCATATACTGTTAACATGAGTGATGGCAGTACCCTCACCAGGAATCGCCGACACATGCGCCCTACTGGAGAGAAGTTCAGCATCAGCAGTGACGACAAGACTCTAGCAGCATCACCATCATATAGTCTACCCGACAACCCCCTGGCGGAAGTAAAACCACCCAAACAAGAAGAGTCTACTCCACCAAGTGTCGGACCGTCTGCATGTACCCCACCAGTCACCCCAACACCCCGCCGATCAAGTCACGTTTCGGCCATTAATCAATGGCCTTCATCAGTATTAATCGGAAACGTTGCGATCTTTGAAAAACGTTACAGTACTCCAGGAAAGCCTCTTGGTGGATGCATGCGTCATTTCAACATGATCGAGGCTAACATGAAATTAAGGAGACAGGAAGTTACCAAACTATTGGGTGCTGATGAAGTTGTCATGTCTATTGTTGGCTTCCCAAGGACCTTGTCACAGAACATCAGAGAACGAAGAGGTTCTAAGGTTGCAATTAATGTTCCAATTTTCAAGGATGTCAACACACCATCACCATTCATAGAAGACTTCCCAGCAGTTGAAGGTGAAGGTGCAAGTGCAGCAAAGCCAGACCACATTTACCTGGATGCAATGGGCTTTGGCATGGGATGCTCTTGTTTGCAGATGGCATTATCAGCTGGAACTCCTATCTTCCGTGGTTACCTAGGAGACGTGGATTGTAGATGGAGTGTGATTGCAGGCTCAGTAGATGATCGCAGACCAGAAGAGTTAGGTCTTGAACCGTTGAAGGAGAATAAGTTTGTGATTCCCAAGTCCCGTTATGATTCCATCAGCTGCTATTTGTCTCCAGAAGGTGCCAAATACAACGACATTGAGTTGATAATGGATAATGAAATATACAAACAGCTAGTTGAAAACGGTATCGATGATTTGCTGGCTCGTCACTATGCACATCTGTTCATAAGAGATCCTATGACTCTGTTTGAGGAGCACATCCACGAAGATGACAAGCAAAGTTCCAACCATTTTGAGAACATACAGTCTACCAACTGGCAAACCATGCGCTTTAAACCTCCCCCTCCCAACTCTTCTATTGGATGGAGGGTAGAATTTCGACCAACCGAGGTCCAGCTAACAGACTTCGAGAATGCAGCTTTTGTTACCTTTGTGGTGCTGTTGTCCCGTGTGATCTTGTCGTTTGACTTGAATTTACTCATGCCAATCTCCAAGGTTGATGCCAACATGCAGGCTGCACAAAAAAAGAATGCTGTGCTCGATGGAAAGTTTTACTTTAGGAAAACCTTGAAGAATTGTGACCTGATGACCACAGCTCGTTGGATGCGCGAGTTTGTGCAGACTCATGCGGACTACAAACAGGACTCGGTTGTCTCCGACTTGATCTGCTACGATCTCATGACCACGTGCCACAAGATCGCGAATGAAGAAATGAAATGCCCAAAGCTGCTTGGCTACCACATGTCTAAGTCGAACGACGTTCTAGAAAAGAAATGCATTCGAATTCAAAATGAAATGGAGCAATTGGAAGACGCGAAGCGAAAGGAAATGGGTATTTGA

Transcript

Actinostola_01575

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03074	GCS	Glutamate-cysteine ligase	Family	Interproscan
PF17917	RT_RNaseH	RNase H-like domain found in reverse transcriptase	Domain	Interproscan
PF17921	Integrase_H2C2	Integrase zinc binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001584	Domain	Integrase, catalytic core	Interproscan
IPR004308	Family	Glutamate-cysteine ligase catalytic subunit	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR014746	Homologous_superfamily	Glutamine synthetase/guanido kinase, catalytic domain	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR041373	Domain	Reverse transcriptase, RNase H-like domain	Interproscan
IPR041588	Domain	Integrase zinc-binding domain	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11164	GLUTAMATE CYSTEINE LIGASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0004357	Molecular Function	glutamate-cysteine ligase activity	Interproscan
GO:0006750	Biological Process	glutathione biosynthetic process	Interproscan
GO:0015074	Biological Process	DNA integration	Interproscan
GO:0017109	Cellular Component	glutamate-cysteine ligase complex	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-