Detailed information of KAJ8387624.1 in Aldrovandia affinis Gene info
Gene IDAnnotationScaffoldStartEndStrand
KAJ8387624.1NUCLEOLAR PROTEIN 9AAFF_1.1_unplaced_208305195338970+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00227ProteasomeProteasome subunitDomainInterproscan
PF00806PUFPumilio-family RNA binding repeatRepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000243FamilyPeptidase T1A, proteasome beta-subunitInterproscan
IPR001313RepeatPumilio RNA-binding repeatInterproscan
IPR001353FamilyProteasome, subunit alpha/betaInterproscan
IPR011989Homologous_superfamilyArmadillo-like helicalInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR016050Conserved_siteProteasome beta-type subunit, conserved siteInterproscan
IPR023333FamilyProteasome B-type subunitInterproscan
IPR029055Homologous_superfamilyNucleophile aminohydrolases, N-terminalInterproscan
IPR040000FamilyNucleolar protein 9Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR13102NUCLEOLAR PROTEIN 9Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000056Biological Processribosomal small subunit export from nucleusInterproscan
GO:0000447Biological Processendonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0000472Biological Processendonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0000480Biological Processendonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0004298Molecular Functionthreonine-type endopeptidase activityInterproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0005839Cellular Componentproteasome core complexInterproscan
GO:0030686Cellular Component90S preribosomeInterproscan
GO:0030688Cellular Componentpreribosome, small subunit precursorInterproscan
GO:0051603Biological Processproteolysis involved in protein catabolic processInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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