Gene detail

Detailed information of KAJ8351104.1 in Aldrovandia affinis Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
KAJ8351104.1	REGULATOR OF RPOS	AAFF_1.1_unplaced_2056	2227	5728	+

Gene Structure

More details in Jbrowse Sequence

CDS

AAFF_T00150110

ATGTTGACCGCCCGGGACTCGATCGAGGACCGTATCGACCGGAAGCTCGATCACGGCGCCGACGACTATCTCGTCAAACCTTCGTGCTCGGGCGAACTCACCGCCCGATCCGATCACTTCGGCGCGACGCGGCCAAGAGCGGGTCGGTGCTGCGGTGGGCGATGTCGAACCGACGACACACGGCACCGGGCCCGTCGTTGTCGACGCGATCTCGAACTGACCGCCAAGGAATTCGCCCTTCTGCGTTACTTCATGTCCCATGTCGACGAGGTGTTGTCGCAGGAGCACCTCCTCGAGCATGTCTGGGACGAACATGCCGGCCGTTCACCAACACGGTTCACGGTCAGGACACTTCGACGCAAGCTGTCGGACGACGACGAGTCACAGTTGATCGAGACCGTGATCGGCTCCGGTTATCGCCTGCTCGATCCGACGCCGGTTCCGCCGACGGCGCCGACACCGCCGAGGTCAACGGTGACTGAGGCCGATCCTCGGCTTCATGGCTGGGCGGGTTCGATCCGCTTCCGGCTCACGGTTCTCTATTCTGTTCTGCTCTTCGGCTGCGACCCAGTCGTCGTCGGCGGGATCCTACGCCGGTGTCGCCCGAAGCCTCCGAGCGCCAGCGGCCCTGCGGCGCTGGTGGAGGCTGGCTGCTGCCGGGAGAGTCAGGGCAGCCCGAGATCGCCAGGCTCGAGATCGAGGTGCCCGACTACCTCCTGCTCTTCGAGCGCGCCGTCAACGAACAGGCGCTCAGTCAGCTCCGGACCTATACCTTCGGGGCGCTGGGCCTTCTCTTCGTCGGAAGCCTCTTCGTCAGGTGGTTCGTCGCGCGGTTTGGTCCTACGGGCCGTCGGCCGGATCACCGGCGTCGCGCGAAAAAGGAGATCGAAGCCACCGATCTCTCCCGGCGCATCGACCTCGACGGTCCTGACGACAGGTGGAAACAGCTCGCCGACACTTTCGACGGCATGCTCGAGCGCATCGACACCGCGTTCGAACGGCGGAGTTCATCCACGAAGCGAGCCACGAACTGGGAACCCGCTTGCGGTGATCGACCAACATCGACGTCGCCCTCGACGACCCCGATATCACGACCGACGAGTTGCGGTCGGTGGGGGGGTGGTCGGCCGCTCGGCGGAGCGCATGTCGACGCTGGTCGACGACCTTCTTCTTTACGCCCGTCACGGGACCCGGGAGATGCGCCGCGAGGATGTCGACCTGGTCGGCGAGGTGCAGGATCTCGTGGAGGAAATCTCGTGGCTAACGCAGTCCGCCTGCCCCAAACACTCCACGGTGACGGCCGGTGCCGACGAGGGCCGCGTTGATCACCTCTCGGTGATCGACGAGGGCCCCGGGATCGGACCCGAGGACCAGATGCGGTCTTTCAACGCCTGGCGCGGCGACGGCGCCGAGGCCCGCACCGCGGGCCGGTCGGGGCTCGGCCTCACCATCGTCCGCCAGATCGCCGGCCCATGGCGGCCGGGCGAGCTCGAGTCGGCGCTCGGAAGCGGATCGCAGTTCACGCTGCGGCTTCCCGCAGCTGATCGCCGAGACAGAACTGCTTTGCACCTCGGATCCCGCAGGATCCACCGCTTGGCGCCCGTACTCCCGCCATGTCGGCGCCGTCGGTGCTGCGGGGATCTATCGAGCGACGCTGGCCTTCGAGAAGTCGATCGATCTCGGCATCGGGATCCGGTGCCGCGAGGTCGACGTGGGATACGGGTGTCGCGGCGCGGTGAGTATCGACTCGCCGGAACAGCAGGTGGCGGACCCCGCGATCGTCGGGCCGGCCCCCGAGCTCGATTCCGCAGCCGCCCGCCTCCTCGGGCCTCAGGCCGTCGGTGCTCGGGTCGACCCCCAACGCACCTGTTGCAGCCGCCCACTGCGGCCCGTCCTCCGCGGCCCGGCGACGGCGGCCGCCAGTGCCCCCGATTCGCACCCCCAGTGCCTCCGACGGATCCGCTCTCCGGTCCGAAACGGAAGCGCTGGCGGGTGGCGGTAAGCACATTCGCCGTCGCCTCTGCCGCACTCTCCCCTCGTCCGCGGCATCGTCATCGGCTCGGCGCTCACCGACGACGTGGTGACGAATGCCAGCCCGGTCCCGGTGAGCGACACCATTGCACCACCAACGATCCCATCGAGGCCACCACACCGTCGCCCCTCGAGGTCGAGCCAGCCCTCTCGCCGGCGACGAGTCGGACGAACCGGTCGCCGACGTGGCTGCGGCCGTCGCCCATCCGTCGTGCTGATCCAGACCGGCTTCGGACAGGGTTCCGGGATCGTGGGATGAACAACGGCTACATCGTCACCAACGACCACGTGACCGGCGACGCCGAGTCGGTCGTCGTGCAGTTCGCCAACGGCAATCGATCGGTGACCGCCGGCATCGTCTCCGCCGTCAACCGCATCAACGAGTTCGGTGGTCTGGACGAGTCCCGACCTGTCGACGTCGAGATGATCCAGACCGACGCACCGATCAACCCGGGCAACTCCGGCGGGCTCTCGCCGACCGCCAGGTCGGGTGATCGGGATGAACACGCAGATCCGACCGCAGGCGACATTAACGGCAACGTCGGCGTCGGCTTCGCTGTCCCCTCCGACACGATCGCTCTGTCTGCCGAACGGATCGTCAACGGCGAATCTCCTCGAGCTGGCGGTCTCGGCGTGAGCAGCGACACCCCCGCCGACGGACGATCGGCGCCCTCATCCAGTCGGTGGTCAATGGCGCTCCCCGCCGACAACGCGGTCGCTGTGGCCGGTGATCTGTCGTGGCGCTCAACGGCGAGCTGA

Transcript

AAFF_T00150110

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00486	Trans_reg_C	Transcriptional regulatory protein, C terminal	Domain	Interproscan
PF02518	HATPase_c	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001789	Domain	Signal transduction response regulator, receiver domain	Interproscan
IPR001867	Domain	OmpR/PhoB-type DNA-binding domain	Interproscan
IPR003594	Domain	Histidine kinase/HSP90-like ATPase	Interproscan
IPR004358	Domain	Signal transduction histidine kinase-related protein, C-terminal	Interproscan
IPR009003	Homologous_superfamily	Peptidase S1, PA clan	Interproscan
IPR016032	Homologous_superfamily	Signal transduction response regulator, C-terminal effector	Interproscan
IPR036388	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR036890	Homologous_superfamily	Histidine kinase/HSP90-like ATPase superfamily	Interproscan
IPR039420	Family	Transcriptional regulatory protein WalR-like	Interproscan
IPR043504	Homologous_superfamily	Peptidase S1, PA clan, chymotrypsin-like fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48111	REGULATOR OF RPOS	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000156	Molecular Function	phosphorelay response regulator activity	Interproscan
GO:0000160	Biological Process	phosphorelay signal transduction system	Interproscan
GO:0000976	Molecular Function	transcription cis-regulatory region binding	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0016310	Biological Process	phosphorylation	Interproscan
GO:0016772	Molecular Function	transferase activity, transferring phosphorus-containing groups	Interproscan
GO:0032993	Cellular Component	protein-DNA complex	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-