Detailed information of Chiridota_g2605 in Chiridota heheva Gene info
Gene IDAnnotationScaffoldStartEndStrand
Chiridota_g2605MALATE DEHYDROGENASEchr_23181611631832540+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00056Ldh_1_Nlactate/malate dehydrogenase, NAD binding domainDomainInterproscan
PF00075RNase_HRNase HDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF02866Ldh_1_Clactate/malate dehydrogenase, alpha/beta C-terminal domainDomainInterproscan
PF14529Exo_endo_phos_2Endonuclease-reverse transcriptase DomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000477DomainReverse transcriptase domainInterproscan
IPR001236DomainLactate/malate dehydrogenase, N-terminalInterproscan
IPR001252Active_siteMalate dehydrogenase, active siteInterproscan
IPR002156DomainRibonuclease H domainInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR010945FamilyMalate dehydrogenase, type 2Interproscan
IPR011274FamilyMalate dehydrogenase, NAD-dependent, cytosolicInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR015955Homologous_superfamilyLactate dehydrogenase/glycoside hydrolase, family 4, C-terminalInterproscan
IPR022383DomainLactate/malate dehydrogenase, C-terminalInterproscan
IPR036291Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR23382MALATE DEHYDROGENASEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0004523Molecular FunctionRNA-DNA hybrid ribonuclease activityInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006099Biological Processtricarboxylic acid cycleInterproscan
GO:0006107Biological Processoxaloacetate metabolic processInterproscan
GO:0006108Biological Processmalate metabolic processInterproscan
GO:0006734Biological ProcessNADH metabolic processInterproscan
GO:0016491Molecular Functionoxidoreductase activityInterproscan
GO:0016615Molecular Functionmalate dehydrogenase activityInterproscan
GO:0016616Molecular Functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptorInterproscan
GO:0030060Molecular FunctionL-malate dehydrogenase (NAD+) activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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