Gene detail

Detailed information of Actinostola_05778 in Actinostola sp. Cb2023 Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Actinostola_05778	PROTEIN CBG26694	scaffold574_size274803	102876	118143	+

Gene Structure

More details in Jbrowse Sequence

CDS

Actinostola_05778

ATGGCCAAACTAAGTGCAGCAAAGAAGGTCATGTGTGCTGGTGGTTTTAACTTGCGCAAGTGGAACTCTAACTCAAGCCCCTTAGTGGAGGCCATAAATAGCGAGGAGGTCAAATACGCAGAACACGAGCCAACGACATTGAAAGCTACTACTGTTTCAGAAGACGACTCATCTTACGCCAAAGGATGGGACGACACCTATGACACGCGTTCTACTGACTGTTTGGATGTTGATAGAGAAGAGTACAATCCTTTAAAGGACAAGTACTTTGTCGGGGAAGTCAAGATCGACAATAAAATATACCTCCAAAAGCAGTTGGTTCCAAACACAGATGAATTTATTTTCAGTTATCCAGAAGACAAACTAGTACCAGCAATTATGTATGGGCCCGATGTTATCAATGGCTACAATGGGGACAATCTGATAATTGGAGTCATTGCAAATTTCCACAATGAACTTGGAGTAATGTACTCCTGGTACAAAGATGGGCAGCTCATGTGTAATGGTCACAACCAGTGTCTTATTAAAGTGTTAGAAATAGGTACATATGTTGCTCAGGTACTATATGGCGAAGAAAGTTTTAGTTCAGAACCGGTTAAAGTTGGTTTGGAGGATGTGGGCAGTGAACCTAAGGAGAATAAAACTCAAGCAACAGCAAAAGAGACCACACAGAGTTCCAGTGGACCTGGAGTGCCCAAACTTCCTATTGGCCCTGAGAATGAGAGACAGAGTGACACACTGACGGATACAGCAAGCTCTTTAGTTCATGAGATTGACTTCGAAAGCCTGAATGTGAACTTCAAAGACATACTTGGAACTGGGGCATATGGCACAGTGTACAGAGGGAAGTGGGTGGGGACAGAAGTTGCAGTAAAAGTAATTAAAAGAGCGATCTCCTACAAGAATGTAGTTCTGAAAGAGGCACACCTCCATGCCACTTTACGGCACCCAAATATCGTTACCCTGATGGGGGTGTCTTTCCACAACAAAGACATCGCATTTGTTACGGAACTTGTTAATGGCAATTCACTCCAATATTATATCGATGAAGAAATTACATTGCCTGAAGAAACGTCGTCTAAAGTGGTAGCTGGTATCGTCAAAGGAGTGGCATACCTCCATGAAGTTATGGTGGTACACGGGGATGTGAAGCCAGCTAACATTTTAGTCAGCCAGGAGATGCATGCCAAAATTTGTGATTTTGGCATTGGCACGCTGAGGAAGAAGTTGTCTGTGACAGCAAGTTTCACCGTTAACGGCTCGCTGCATGGAACCATTACATTCCTTCCACCTGAATGTCTCCTTGATGGCAAGCATACTGACTTCAAGTCCGACATCTGGTCACTTGGCATCACTCTAGTGGAGTTCTTAACCCTTGGGGTTGCATGGGAGGATGTTTTCTCGGACCAATCTGAGAAGACCCTCTACTGTTTAGTTAGTTCGTATTTTCCAGTGTTAATACGAACTAGGAAGTTTGAAGTGGCCCTTCTCGTCCACCGTAAAACGGAGCGCAACTACGCCCAAATAGAAAAGGAATGTCTCGCCATCGATTTTGCAGCTGAACAATTTGAACATTACATACTGGGCAAAGACAATGTCCGTGTTTACACAGACCACAAGCCACTGGTCACCATTTTTAACAAGTCCATCCTAAGAAGCCCCAAACGTCTTCAGCGAATGAGGTTAAGACTACAAAAATACTTACTTGACCTAGAGTATAAACCAGGACCGACGATGTATATCAGTGACACACTTTCTCGAGCAGCCCTGCCAATCAAACAAATTGACGAAGACATGCCCCCCTATCAGATCTTCCAGATTCTAGAAGAATGTAAGTTGCAAGAGCAGTTTGAAGTGATCGGCCTAGAAGACTCGCTATTTGTAACAGACTCGAGACTAAACGCCATTAGACGCGAGACAGCTAAGAACTTACCACTTCAAACACTAATGACCATCATCAAGGATGGATGGCCTGACAGCAAGATAGATGTGCCACTCTGCGATCGAGAATGTTGGCCTTACAGAGACGAGCTAACCACTCACAATGGACTAGCCTACAGAGGAACCAGAATCATTATACCAACCTCTATGAGAAAAGAACTGGTCAACAGAGCTCATGTATCCCATCTAGGGATCCAATACACACTCAACACAGCCAGAGATATAATGTATTGGCCAAGGATGACAACAGACCTCACCGATGCTGTAAGTCATTGTGAAACCTGCCAAGCAGCACAACCTGCATCCCAGAAGGAACCCATGATGACTCATCCAATACCGCAACTACCATGGCAAGCTGTAGCAAGCGACTGTTTTGAGATAGACGGACAGGACAACACTTCTCCAGTCTAG

Transcript

Actinostola_05778

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069	Pkinase	Protein kinase domain	Domain	Interproscan
PF17917	RT_RNaseH	RNase H-like domain found in reverse transcriptase	Domain	Interproscan
PF17921	Integrase_H2C2	Integrase zinc binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000719	Domain	Protein kinase domain	Interproscan
IPR008271	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR017441	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR041373	Domain	Reverse transcriptase, RNase H-like domain	Interproscan
IPR041588	Domain	Integrase zinc-binding domain	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR050951	Family	Retrovirus-related Pol polyprotein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR37984	PROTEIN CBG26694	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-