Gene detail

Detailed information of Actinostola_03928 in Actinostola sp. Cb2023 Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Actinostola_03928	ARSENITE-RESISTANCE PROTEIN 2	scaffold33_size1007633	21900	51738	-

Gene Structure

More details in Jbrowse Sequence

CDS

Actinostola_03928

ATGGGCGACAGCGACGAAGAATACGATAGAAGAAGAGCACGAGATAAGTTCCGCAGAGAAAGAAGTGATTATAACGACCGTAGGCGGGACAGGGACGACCGTGGAGGGTCGAGAAGAGAGGATTGGGTGGACAGGAGACGAGATAATCAAGGCTCCTGGGATCAAAGACGTAGAGGAGATTACAGAGAGTTTGAACGAGGCAGGAGAGATAGCTCTGGTAGACACCATGAAATGAGCCCTCCTATGCCAAAGCGTATGCGAAGAGATTGGGATGATCCATTTCACAATGATGGCAATTTTCCTTTCGGCGGAGGAGGTAATAATGCTGGGGGTAGCATACACCATGGTACATGGAACCACCCAGGAGGGGACGTACAACAAATGCCGATGGGTGGACAAGATGCGCGACAGATGAGACCTGATGCAACTCCAGATGCACCCCAGGGCCCAGTAATGCTCACATTTAAGCAGTTCCTTAATGCTCAAGACGATAACATTGACGACATGGAAGCTGTGAAGAAGTATCAGGAGTACAAGTTAGAGTTCCGTAAAACGCAACTTGGTGATTTCTTCCAGCAGCATAAAGAAGAGGAATGGTTCAGGGGAAGGTACCACCCCAAAGAAGCCTCTATGAGGCAGAAAGAAATGCAAAAAGCAGTAAGAAAAAGAGTAGCATTCTTTCTGGAATTGATGAAATCTGGACGTGCCGATGCTCTGCTCCTAGATATGGACCATGCAGATGATATAGTTAAACTTCTGGATGCAGCTGTCATCAAACTTGAAGGTGGCACAGACTTTGACCTCTCCATCCTGGACCGTGATCCATCACCAGAAAGAAAACCTGGAGCCCACCATGAAGATGATAGAGACATGGCCTCATCTTCTGGGTCCAAAAGAGAAAGAAGGAAAGAAAGCACAAGATCTCAATCAAGCTCACCACCACGGTCACCCACACCAAGAAAATCTACAGAAAAGAAAGATTGTTTAACACCCACAGAATCTAGTCCAGTAATGGCTCCAGTCTCTCCATCCTCTGTTCCTTTACCTGATGCACCGCCCCCAGTATCTAAACCAGAGGCTGCTTCTCAAAGTGACGCCAAACCACTCTCCATGCCAGATCCAACACCTGAACAAAAGCAGCTACAACAAAGAGCTCAGCATTACCATCAACAGAGTCAGCACTTTCAACTGGATGAAACTGGAAAGAAAAGACGCAAGCACCGTCATCGCGAACCATACTACTACGATGCCATGGAAGATGAGAGCGAGAGCGAATCAGAATCTGATTCTGATTCCGAGCCAGCTCCTCCTGGTGAAGAAATGGTTTCCAGTGAATCCAAAGGAGAGGAGGAACTATTGCCGCCAGGAGTAGAGGCTGAGCCAACACCAGTTGATGCAAGCATTCAGTTGCCAACAAGCTCTTCAGGGACTGATAATGTTACAAAAACAGCACCGGCCAACAAGTTAGATGACTCTTCAATACATGTGGATTCTACTCAGAGCCCTGACCCAAAGAAACCTTCCGACAGCCCTGACCAATCAGAAGAGAGTATAAAGAGAGGTACTGGAGACCCTCAAGTGGGTAGTACAGTCAATACAGACAATGCTGTAAGCACCCGGGGTAACGAAGATGTTGACATGGTCCCAGCGTCATCTAGTGAAGCAGAGAGGAGAAATTCAAGAGATGCTGAAGCAGCGTCCAATGATGTTAAAATACCAACCACACCAGTTACACCAGACATGACAAAGAAAAATGATGAAGTCATTGATTCCAACAAACTAGCGGAAAAGAAGGAAGTGAAGGAGGAAGAGAGCCCCATGAAGACACCCATGACAGAATCTAAAGAGAATACAGTAGAGGAGGAGAAAGATTCTGCTGAAGATGCAGAGGAAGGGGAAACTAAGGGCAAGGAAGTGGTGCCATCATCCCCTGAGCCCAGGCCGTTACACAAGACATACTCACTATTTATGAGGAATATACCACCCAGTATATCCAAGACAGACATTGGAGCAATTTGCAAAAGATTTCCTGGTTTCCTTAGAGTGGCTCTCTCAGACCCCAGTCCTGATAGACGGTTTTATCGAAGAGGTTGGATCACCTTTGAAAGGAGCGTCAACATCAAAGAAATCTGCTGGGATTTGAACAACATCAGGATCAAAGATAATGAACTAAACCCTGTAGTCAACCGTGACTTATCTCGTCGTGTACGCTCAGTCAATGGAATCACGTTTGCAAAACAAGTCATCAGAGAAGACATCAAGTTAGCTGCTCAGTTAGTCAGAGTACTTGACAAAAAGGCTTCTGTCTACGAGAAAGAGAAAAAGGTGGAAGAAACAAATGGAAATGAAAAAGAAAAAGAGCCGGAGAAGAAAGAAGAAAAAGAAGAAGGCGAAGAGGGACAATCAGAAGAGAAAGAAGCTTCCTTCAGCATACCAGACAACAACCCCATTCTGGCATCCCTCTCAGAGGATGCTACAGAAGAGGAAGACATGGAGAAGAAATGGAACTCTTGGGAACATCATCAACCACACAGGACACCATCACAGAGCATATCGAATGGTCAAGGCGAGATTTTGCGAGACTCCGAGACAAGGCACTTTTTCACCGATTTACCTTGTGAAGTTTTGTGTTTCATCCTGTACTTCTTCGAGACTCTGAGACAGTTTTTTGCAAAGAAACGAGACTTCTTACCTTTTCAAGAATGGCAAAAGAATCTAAAGCATAAGCTTGACCCTTACATGGAGGATAAGGAACCTATCAGTGATGATGAAGTTTCTAAACTTGTGGAAAAGTTTGTTGAAGCCAACACACAAGAGCTCGCTAAGGACAAGTGGCTGTGTCCACTCAGTGGCAAGAAATTCAGGGGTCCAGATTTTGTCAGAAAACACATCTTTAACAAGCACGGTGACAAAGTAGAAGCTGTCAAATTAGAGGCAGAGTTCTTCAACAGGTATTTAAGTGATCCCAAGCGACCACAGGATCCAGAGCCGACACAGCTGAAACAACCTGGACCACAGGGTCATGTTGGTGGACAAATGTTTGGACAGCAACACGAGGGTGGTCAGGGGATGGTTGGATGGGGGCCTAGGCCACACATGATGATGTATGGTCCCCGTGGTCCATACACCCCACATTCGTTTGGAGGTTTTGGTCCAGAGGGCTATGGCAGAGTACTTCACCCATCACATATCAAAGCTCTAATACCTCAAGTAATCAAACTCGCTTCTAAAGAAGTCAAAGAAGTGTTGTATGTAGATGTTTTTCGTCCTCAAGACACGAGTCTCGCAGCCTTGTACTTGCTTCTAGTTGAAGTGTACGGGAGATACTACCCCGGGCAAGGCAGTCTAGACATTCGACTACTACTTCCAGAGCTGGGCCAAAACAGGCCTAGAACCCTGTCAATACATCCAGAAACTGCTTTCCTCATCGAGACGCCGGGTTCTGTGGGAGGAACTGTGAGTGTAGAGAATCTAACATCGTGGCTGGATGAGAGATATACCGGGTTGTCACAAATTAAGTCCAAAGTTCTGAGTCTGGTAGATGAAGGGCCACAGCCTAATGAGTCGTATAGCGCTCCTCTGTTGAACGTGTATGACGAGGTAGCTTTAGGTGGTACCTTTGATCGTATTCACAATGGGCACAGACTGCTATTGGGCGTGGCTTGCCTTCTGTGCCAAAGAAAAATCACTGTTGGACTCAGTGATGGCCCACTTCTGGAGAGAAAGCTGTTGAAGGAACTTATACAACCCTTTGAAGAAAGGAAGAGAATTGTGGAACAATTTGTAGAAGATATCAGACCAGAGGAAAGTCATGATTCCATGCCTGGCAAAACCAGTGACACAGACAAGATGAGTTCAACAGCTGAAAGACATAAACTTCTTGGAAAACTCCTGAGGCCAGTGAAAGCCAGCAACAACCAGGCCAAAGGTCGTAGGCCCTATGTAATAGGTCTTACTGGTGGGATTGCTAGTGGAAAGTCAGCCATCAGCAAAAGACTTGAAAAACTTTCTGCCACAACGATCAACTGTGATCTTCTTGGTCACTTGGCTTATGCCCCGGGGAAGAAAGCTTACCATCAGATTATTGAAGCGTTTGGAAATGAAGTTGTAGCCAGTGATGGTACAATCAATCGAAGAGCATTGGGTCCCATCGTGTTTGCTGACAAGTCCAAGCTTATTGAGCTTAACAACATTGTTTGGCCTGAGATTGCAAACTTGGTTCAGGAGAAGATTGAGAGCTATGGAGCTGAAGGTGCTCAAGTTTGTGTTGTTGAAGCTGCTGTACTTCTAGATGCTGGCTGGGATAGTGTTGTAGATGAGAAGTATGAATAA

Transcript

Actinostola_03928

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01121	CoaE	Dephospho-CoA kinase	Domain	Interproscan
PF01467	CTP_transf_like	Cytidylyltransferase-like	Domain	Interproscan
PF04959	ARS2	Arsenite-resistance protein 2	Family	Interproscan
PF12066	SERRATE_Ars2_N	SERRATE/Ars2, N-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001977	Family	Dephospho-CoA kinase	Interproscan
IPR004821	Domain	Cytidyltransferase-like domain	Interproscan
IPR007042	Domain	SERRATE/Ars2 , C-terminal	Interproscan
IPR012677	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan
IPR014729	Homologous_superfamily	Rossmann-like alpha/beta/alpha sandwich fold	Interproscan
IPR021933	Domain	SERRATE/Ars2, N-terminal	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR035979	Homologous_superfamily	RNA-binding domain superfamily	Interproscan
IPR039727	Family	SERRATE/Ars2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13165	ARSENITE-RESISTANCE PROTEIN 2	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0004140	Molecular Function	dephospho-CoA kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006397	Biological Process	mRNA processing	Interproscan
GO:0009058	Biological Process	biosynthetic process	Interproscan
GO:0015937	Biological Process	coenzyme A biosynthetic process	Interproscan
GO:0016604	Cellular Component	nuclear body	Interproscan
GO:0031053	Biological Process	primary miRNA processing	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-